RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 WDR83OSQ9Y284 106 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 FAM90A5PA8MXJ8 464 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 TIMM8AO60220 97 aaPredicted RBP7.02□□□□□ -1.29
TDP1-201ENST00000335725 BNIP3LO60238 219 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 IGHMP01871 453 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 ATP5G1P05496 136 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 CCL28Q9NRJ3 127 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 C5orf49A4QMS7 147 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 PRRG2O14669 202 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 MGST3O14880 152 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 MBNL2Q5VZF2 373 aaKnown RBP7.01□□□□□ -1.29
TDP1-201ENST00000335725 Q6ZRM9 215 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 TMEM158Q8WZ71 300 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 SLC25A2Q9BXI2 301 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 CHCHD2Q9Y6H1 151 aaPredicted RBP7.01□□□□□ -1.29
TDP1-201ENST00000335725 TMEM131Q92545 1883 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 OOSP1A8MZH6 123 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 HHEXQ03014 270 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 TRPT1Q86TN4 253 aaKnown RBP7.01□□□□□ -1.29
TDP1-201ENST00000335725 CHCHD5Q9BSY4 110 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 ZNF442Q9H7R0 627 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 NCOA6Q14686 2063 aaPredicted RBP7.01□□□□□ -1.29
TDP1-201ENST00000335725 TRBV25-1A0A075B6N4 114 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 TRAV8-1A0A0A6YYK1 113 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 A0A0J9YW62 118 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 C15orf62A8K5M9 175 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 C4orf51C9J302 202 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 NCR2O95944 276 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 STATHP02808 62 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 DEFA4P12838 97 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 CACNG7P62955 275 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 PRSS3P2Q8NHM4 247 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 ZNF355PQ9NSJ1 428 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 TCF19Q9Y242 345 aa7.01□□□□□ -1.29
TDP1-201ENST00000335725 TRAV2A0A0B4J234 112 aa7□□□□□ -1.29
TDP1-201ENST00000335725 B4GALT1P15291 398 aa7□□□□□ -1.29
TDP1-201ENST00000335725 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
TDP1-201ENST00000335725 SCN3AQ9NY46 2000 aa7□□□□□ -1.29
TDP1-201ENST00000335725 HRCT1Q6UXD1 115 aa7□□□□□ -1.29
TDP1-201ENST00000335725 RND1Q92730 232 aa7□□□□□ -1.29
TDP1-201ENST00000335725 HIST1H4GQ99525 98 aa7□□□□□ -1.29
TDP1-201ENST00000335725 FGF22Q9HCT0 170 aa7□□□□□ -1.29
TDP1-201ENST00000335725 CPAMD8Q8IZJ3 1885 aa7□□□□□ -1.29
TDP1-201ENST00000335725 RRHO14718 337 aa7□□□□□ -1.29
TDP1-201ENST00000335725 ZG16O60844 167 aa7□□□□□ -1.29
TDP1-201ENST00000335725 TUSC2O75896 110 aa7□□□□□ -1.29
TDP1-201ENST00000335725 APOHP02749 345 aaPredicted RBP7□□□□□ -1.29
TDP1-201ENST00000335725 EDN2P20800 178 aa7□□□□□ -1.29
TDP1-201ENST00000335725 CNTFRP26992 372 aa7□□□□□ -1.29
TDP1-201ENST00000335725 HSPE1P61604 102 aaKnown RBP7□□□□□ -1.29
TDP1-201ENST00000335725 FAM53BQ14153 422 aa7□□□□□ -1.29
TDP1-201ENST00000335725 Q6ZQT7 251 aa7□□□□□ -1.29
TDP1-201ENST00000335725 COQ2Q96H96 371 aa7□□□□□ -1.29
TDP1-201ENST00000335725 ALKBH4Q9NXW9 302 aa7□□□□□ -1.29
TDP1-201ENST00000335725 MZT1Q08AG7 82 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 FOXC1Q12948 553 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 KLF17Q5JT82 389 aaPredicted RBP6.99□□□□□ -1.29
TDP1-201ENST00000335725 IMUPQ9GZP8 106 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 PLEKHA3Q9HB20 300 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 HEYLQ9NQ87 328 aaPredicted RBP6.99□□□□□ -1.29
TDP1-201ENST00000335725 EPDR1Q9UM22 224 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 MPDZO75970 2070 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 LOC107984156A0A0G2JMH3 177 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 ARL17AQ8IVW1 177 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 FAM57AQ8TBR7 257 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 STARD5Q9NSY2 213 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 PCNX3Q9H6A9 2034 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 CXorf51AA0A1B0GTR3 108 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 PMS2P5A8MQ11 134 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 H3BVH4 76 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 SPRY1O43609 319 aaPredicted RBP6.99□□□□□ -1.29
TDP1-201ENST00000335725 IGHG1P01857 330 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 IZUMO4Q1ZYL8 232 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 SFTPA2Q8IWL1 248 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 SFTPA1Q8IWL2 248 aa6.99□□□□□ -1.29
TDP1-201ENST00000335725 SNRNP40Q96DI7 357 aaKnown RBP6.99□□□□□ -1.29
TDP1-201ENST00000335725 SLC25A10Q9UBX3 287 aaPredicted RBP6.99□□□□□ -1.29
TDP1-201ENST00000335725 IGLV2-8P01709 118 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 MYF5P13349 255 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 PLA2G5P39877 138 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 C1orf53Q5VUE5 145 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 LINC00477Q96M19 166 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 MYMXA0A1B0GTQ4 84 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 LINC01619G3V211 115 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 FCER1GP30273 86 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 TEX36Q5VZQ5 186 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 PDPNQ86YL7 162 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 TMEM52Q8NDY8 209 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 NT5CQ8TCD5 201 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 IGF2BP2-AS1Q96M15 143 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 PRDM6Q9NQX0 595 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 LTAP01374 205 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 Q6ZR03 302 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 GPHA2Q96T91 129 aa6.98□□□□□ -1.29
TDP1-201ENST00000335725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.97□□□□□ -1.29
TDP1-201ENST00000335725 IGKV1D-13A0A0B4J2D9 117 aa6.97□□□□□ -1.29
TDP1-201ENST00000335725 TRBV7-7A0A0K0K1E9 115 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms