RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR1B1Q8NGR6 318 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 RNF7Q9UBF6 113 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 V9GYV3 84 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 CD24P25063 80 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 CD1BP29016 333 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 ERVK-16P61578 105 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
SF1-202ENST00000334944 MIC13Q5XKP0 118 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 OR8B2Q96RD0 313 aa11.32□□□□□ -0.6
SF1-202ENST00000334944 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 OR7C2O60412 319 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 FOXH1O75593 365 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 REG1BP48304 166 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 SSBP4Q9BWG4 385 aaPredicted RBP11.31□□□□□ -0.6
SF1-202ENST00000334944 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 MED13LQ71F56 2210 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 IGKV1-16P04430 117 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
SF1-202ENST00000334944 PNKDQ8N490 385 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 FAM57AQ8TBR7 257 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 CHRDL1Q9BU40 450 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 GNB1LQ9BYB4 327 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 TECRQ9NZ01 308 aaKnown RBP11.31□□□□□ -0.6
SF1-202ENST00000334944 NAV3Q8IVL0 2385 aa11.31□□□□□ -0.6
SF1-202ENST00000334944 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 C18orf32Q8TCD1 76 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 EAF1Q96JC9 268 aaPredicted RBP11.3□□□□□ -0.6
SF1-202ENST00000334944 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 MS4A5Q9H3V2 200 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 SPTBN1Q01082 2364 aaKnown RBP11.3□□□□□ -0.6
SF1-202ENST00000334944 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 KBTBD11-OT1A0A1B0GTJ5 212 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
SF1-202ENST00000334944 CCL3L1P16619 93 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 FOXC1Q12948 553 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 MOB3BQ86TA1 216 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
SF1-202ENST00000334944 NCOR2Q9Y618 2525 aa11.3□□□□□ -0.6
SF1-202ENST00000334944 OR4C46A6NHA9 309 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 H0YJW9 148 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 F2RL2O00254 374 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 UBE2G1P62253 170 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 BSPH1Q075Z2 132 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 Q8N7P7 452 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 FAM169BQ8N8A8 192 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 CCL17Q92583 94 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 TNFRSF14Q92956 283 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 APCSP02743 223 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 DLX1P56177 255 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 DEFB125Q8N687 156 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 TMEM186Q96B77 213 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 GFRA3O60609 400 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 ACTL6BO94805 426 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 CFHR2P36980 270 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 FAM168AQ92567 244 aa11.29□□□□□ -0.6
SF1-202ENST00000334944 AKAP6Q13023 2319 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 CGB3P0DN86 165 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 CGB7P0DN87 165 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
SF1-202ENST00000334944 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 GFRALQ6UXV0 394 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 GTSF1LQ9H1H1 148 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 PRRG2O14669 202 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 CRYBB3P26998 211 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 OR4P4Q8NGL7 312 aa11.28□□□□□ -0.6
SF1-202ENST00000334944 ANKHD1Q8IWZ3 2542 aaKnown RBP11.27□□□□□ -0.6
SF1-202ENST00000334944 C16orf97H3BN30 126 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 VDAC2P45880 294 aaPredicted RBP11.27□□□□□ -0.6
SF1-202ENST00000334944 CX3CL1P78423 397 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 NHLH1Q02575 133 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 ADIPOQQ15848 244 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 MLANAQ16655 118 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 DDB2Q92466 427 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.6
SF1-202ENST00000334944 MGST2Q99735 147 aa11.27□□□□□ -0.6
SF1-202ENST00000334944 SRRM4A7MD48 611 aaKnown RBP11.27□□□□□ -0.61
SF1-202ENST00000334944 LGALS7P47929 136 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 CAMPP49913 170 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 PAX2Q02962 417 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
SF1-202ENST00000334944 FAM71F2Q6NXP2 309 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 Q8NA96 180 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
SF1-202ENST00000334944 C2orf70A6NJV1 201 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms