RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 EFNB1P98172 346 aa8.45□□□□□ -1.06
CHD3-201ENST00000330494 C17orf82Q86X59 251 aaPredicted RBP8.45□□□□□ -1.06
CHD3-201ENST00000330494 GAS1P54826 345 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 RPS20P60866 119 aaKnown RBP8.44□□□□□ -1.06
CHD3-201ENST00000330494 FAM90A1Q86YD7 464 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 CITED2Q99967 270 aaPredicted RBP8.44□□□□□ -1.06
CHD3-201ENST00000330494 TRAV8-6A0A0B4J262 113 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 A8MXK9 166 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 RHOGP84095 191 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 UNQ6494/PRO21346Q6UXR6 183 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 MAPK1IP1LQ8NDC0 245 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 CITED1Q99966 193 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 C19orf24Q9BVV8 132 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 MYOD1P15172 320 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 TMEM70Q9BUB7 260 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 CARHSP1Q9Y2V2 147 aaKnown RBP8.44□□□□□ -1.06
CHD3-201ENST00000330494 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 PSPNO60542 156 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 CCL1P22362 96 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 PSMG3Q9BT73 122 aaPredicted RBP8.44□□□□□ -1.06
CHD3-201ENST00000330494 FOXC2Q99958 501 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 PLSCR4Q9NRQ2 329 aa8.44□□□□□ -1.06
CHD3-201ENST00000330494 C15orf61A6NNL5 157 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 TCF23Q7RTU1 214 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 CD177Q8N6Q3 437 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 MOB4Q9Y3A3 225 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 TRAV8-2A0A0B4J237 113 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 HBBP68871 147 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 C3orf36Q3SXR2 165 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
CHD3-201ENST00000330494 PGPEP1LA6NFU8 196 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 TCF24Q7RTU0 167 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 TXNDC17Q9BRA2 123 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 RFNGQ9Y644 331 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 RIF1Q5UIP0 2472 aaKnown RBP8.43□□□□□ -1.06
CHD3-201ENST00000330494 DOCK11Q5JSL3 2073 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 TRAV5A0A0B4J249 113 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 ZNF585BQ52M93 769 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 FAM19A2Q8N3H0 131 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 MDS2Q8NDY4 140 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 OR5A1Q8NGJ0 315 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 DOCK10Q96BY6 2186 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 DENND4CQ5VZ89 1909 aa8.43□□□□□ -1.06
CHD3-201ENST00000330494 ADAMTS9Q9P2N4 1935 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 TCRBV4S1A1TA0A5B7 111 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 C19orf67A6NJJ6 358 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 RPRMLQ8N4K4 120 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 BMPERQ8N8U9 685 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 VSIRQ9H7M9 311 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 WFDC1Q9HC57 220 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 PNRC2Q9NPJ4 139 aaKnown RBP8.42□□□□□ -1.06
CHD3-201ENST00000330494 KIAA1671Q9BY89 1806 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 DUTP33316 252 aaKnown RBP8.42□□□□□ -1.06
CHD3-201ENST00000330494 TIMP3P35625 211 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 ASIPP42127 132 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
CHD3-201ENST00000330494 TMEM170BQ5T4T1 132 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 SLC25A15Q9Y619 301 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 ZGRF1Q86YA3 2104 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 IGHV2-26A0A0B4J1V2 119 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 GLRX5Q86SX6 157 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
CHD3-201ENST00000330494 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 ZNRD1Q9P1U0 126 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 LYPD2Q6UXB3 125 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 STHQ8IWL8 128 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
CHD3-201ENST00000330494 TRAV3A0A0B4J244 114 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 GPX4P36969 197 aaPredicted RBP8.42□□□□□ -1.06
CHD3-201ENST00000330494 RAB9AP51151 201 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
CHD3-201ENST00000330494 TRBV9A0A0B4J1U6 114 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 WISP1O95388 367 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
CHD3-201ENST00000330494 CD7P09564 240 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 GFI1BQ5VTD9 330 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 COL8A2P25067 703 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 BEND2Q8NDZ0 799 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 PKDREJQ9NTG1 2253 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 H0YIZ8 118 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 APOHP02749 345 aaPredicted RBP8.41□□□□□ -1.06
CHD3-201ENST00000330494 KLF17Q5JT82 389 aaPredicted RBP8.41□□□□□ -1.06
CHD3-201ENST00000330494 LY6G6FQ5SQ64 297 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 PLXNA2O75051 1894 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 TMEM178BH3BS89 294 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 UBE2CO00762 179 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 RPL15P61313 204 aaKnown RBP8.41□□□□□ -1.06
CHD3-201ENST00000330494 DOPEY2Q9Y3R5 2298 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 NUTF2P61970 127 aaKnown RBP8.41□□□□□ -1.06
CHD3-201ENST00000330494 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 EVI2AP22794 236 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 FXYD7P58549 80 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 B3GALT5-AS1P59052 145 aa8.41□□□□□ -1.06
CHD3-201ENST00000330494 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
CHD3-201ENST00000330494 HIGD1CA8MV81 97 aa8.4□□□□□ -1.06
CHD3-201ENST00000330494 OR13C6PQ8NH95 151 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms