RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CACNG8Q8WXS5 425 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 FAM167A-AS1Q96KT0 104 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 SCNM1Q9BWG6 230 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 CX3CL1P78423 397 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 TNXAQ16473 311 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 ANKRD39Q53RE8 183 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 TMEM177Q53S58 311 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 PRR30Q53SZ7 412 aaPredicted RBP11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 CHODLQ9H9P2 273 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 OSTCQ9NRP0 149 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 KALRNO60229 2985 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 PRB4P10163 310 aaPredicted RBP11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 PPOXP50336 477 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 BATFQ16520 125 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 VMA21Q3ZAQ7 101 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 LINC00305Q7Z4B0 112 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 C19orf24Q9BVV8 132 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 MED13LQ71F56 2210 aa11.33□□□□□ -0.59
ATP2C1-201ENST00000328560 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 GSX1Q9H4S2 264 aaPredicted RBP11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 ZNF331Q9NQX6 463 aaPredicted RBP11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 TRAV9-1A0A075B6T8 112 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 A0A1W2PPI3 338 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 TOX4O94842 621 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 CNTFRP26992 372 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 RNASE6Q93091 150 aaKnown RBP11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 SNHG12Q9BXW3 62 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 GNB1LQ9BYB4 327 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 ISLRO14498 428 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 FAM87AP0C7U9 286 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 PAX1P15863 534 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 CAMPP49913 170 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 MFAP2P55001 183 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 RUSC1-AS1Q66K80 236 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 FAM19A2Q8N3H0 131 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 TMEM186Q96B77 213 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 RCHY1Q96PM5 261 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 MRPL32Q9BYC8 188 aaKnown RBP11.33□□□□□ -0.6
ATP2C1-201ENST00000328560 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 COX7A1P24310 79 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 G0S2P27469 103 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 ATP5IP56385 69 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 TNFRSF19Q9NS68 423 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 CD3EP07766 207 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 LOXP28300 417 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 WDR73Q6P4I2 378 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 ASCL5Q7RTU5 278 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 BEND2Q8NDZ0 799 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 OR1L4Q8NGR5 311 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 TBL2Q9Y4P3 447 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 TCRBV4S1A1TA0A5B7 111 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 BRS3P32247 399 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 TBR1Q16650 682 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 VAMP8Q9BV40 100 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 RNF114Q9Y508 228 aa11.32□□□□□ -0.6
ATP2C1-201ENST00000328560 PEX7O00628 323 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 UBE2G1P62253 170 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 PGPA6NDG6 321 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 TCAPO15273 167 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 APCSP02743 223 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 IGF2BP2-AS1Q96M15 143 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 FBXL7Q9UJT9 491 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 CDC42EP3Q9UKI2 254 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
ATP2C1-201ENST00000328560 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 M0R143 59 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 AMY1AP04745 511 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 E7EQL1 145 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 TDGF1P3P51864 188 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 RNF2Q99496 336 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 CORTO00230 105 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 BMPR1BO00238 502 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 MT-ND6P03923 174 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
ATP2C1-201ENST00000328560 RPL27AP46776 148 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 Q8NA96 180 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 NUDT10Q8NFP7 164 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 NUDT11Q96G61 164 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms