RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 OR10X1Q8NGY0 326 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 VAMP8Q9BV40 100 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 FNDC4Q9H6D8 234 aaPredicted RBP16.04■□□□□ 0.16
SOX2-201ENST00000325404 IGKV1D-37A0A075B6S9 117 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 BMPR1BO00238 502 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 MORN5Q5VZ52 161 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 PATE2Q6UY27 113 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 OR4B1Q8NGF8 309 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 E7EUB6 86 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 CDKN1AP38936 164 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 VMA21Q3ZAQ7 101 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 ETFRF1Q6IPR1 90 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 GRAMD2BQ96HH9 432 aa16.03■□□□□ 0.16
SOX2-201ENST00000325404 ZNF331Q9NQX6 463 aaPredicted RBP16.03■□□□□ 0.16
SOX2-201ENST00000325404 MRPL27Q9P0M9 148 aaKnown RBP16.03■□□□□ 0.16
SOX2-201ENST00000325404 PEX7O00628 323 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 NDUFB3O43676 98 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 FCN3O75636 299 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 MYCNOSP40205 109 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 LGALS7P47929 136 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 LRRC10Q5BKY1 277 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 ZCCHC24Q8N2G6 241 aaKnown RBP16.02■□□□□ 0.16
SOX2-201ENST00000325404 NPIPB3Q92617 1050 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 JKAMPQ9P055 326 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 FBXL7Q9UJT9 491 aa16.02■□□□□ 0.16
SOX2-201ENST00000325404 A0A1W2PS18 150 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 DPRXA6NFQ7 191 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 APCSP02743 223 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 CD33P20138 364 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 FXYD5Q96DB9 178 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 SAP30LQ9HAJ7 183 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 SERTAD4Q9NUC0 356 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 KAAG1Q9UBP8 84 aa16.02■□□□□ 0.15
SOX2-201ENST00000325404 ZNF253O75346 499 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 CRYGCP07315 174 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 DLX6P56179 175 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 VN1R17PQ8TDU5 208 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 NRN1Q9NPD7 142 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 TBL2Q9Y4P3 447 aaKnown RBP16.01■□□□□ 0.15
SOX2-201ENST00000325404 VSTM5A8MXK1 200 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 TCL1AP56279 114 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 Q8N976 141 aa16.01■□□□□ 0.15
SOX2-201ENST00000325404 ZNF324O75467 553 aaPredicted RBP16■□□□□ 0.15
SOX2-201ENST00000325404 PAX2Q02962 417 aa16■□□□□ 0.15
SOX2-201ENST00000325404 KLRB1Q12918 225 aa16■□□□□ 0.15
SOX2-201ENST00000325404 ZNF705AQ6ZN79 300 aaPredicted RBP16■□□□□ 0.15
SOX2-201ENST00000325404 VKORC1Q9BQB6 163 aa16■□□□□ 0.15
SOX2-201ENST00000325404 SRIP30626 198 aa16■□□□□ 0.15
SOX2-201ENST00000325404 SSBP2P81877 361 aaPredicted RBP16■□□□□ 0.15
SOX2-201ENST00000325404 TDRG1Q3Y452 100 aa16■□□□□ 0.15
SOX2-201ENST00000325404 MRPL54Q6P161 138 aaKnown RBP16■□□□□ 0.15
SOX2-201ENST00000325404 C19orf35Q6ZS72 473 aa16■□□□□ 0.15
SOX2-201ENST00000325404 KLF12Q9Y4X4 402 aa16■□□□□ 0.15
SOX2-201ENST00000325404 PCNX1Q96RV3 2341 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 YLPM1P49750 1951 aaKnown RBP15.99■□□□□ 0.15
SOX2-201ENST00000325404 PIEZO1Q92508 2521 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 SPINK4O60575 86 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 REG1BP48304 166 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 AMTP48728 403 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 PERPQ96FX8 193 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 PYYP10082 97 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 WFDC8Q8IUA0 241 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 TEX45Q8NA69 505 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 TRGV9Q99603 122 aa15.99■□□□□ 0.15
SOX2-201ENST00000325404 PLCE1Q9P212 2302 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 DIRC3C9JPN6 131 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 CASP6P55212 293 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 TMEM155Q4W5P6 130 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 ATP5L2Q7Z4Y8 100 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 HIST1H1EP10412 219 aaKnown RBP15.98■□□□□ 0.15
SOX2-201ENST00000325404 KLF5Q13887 457 aaPredicted RBP15.98■□□□□ 0.15
SOX2-201ENST00000325404 MRGPRG-AS1Q2M3A8 158 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 KIAA1644Q3SXP7 199 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 NUDT10Q8NFP7 164 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 H1FXQ92522 213 aaKnown RBP15.98■□□□□ 0.15
SOX2-201ENST00000325404 TNFRSF14Q92956 283 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 NUDT11Q96G61 164 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 C7orf69Q9H7B7 122 aa15.98■□□□□ 0.15
SOX2-201ENST00000325404 NCOR2Q9Y618 2525 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 A0A1W2PPI3 338 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 THBDP07204 575 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 LOXP28300 417 aaPredicted RBP15.97■□□□□ 0.15
SOX2-201ENST00000325404 PRRX1P54821 245 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 SLC35B1P78383 322 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 RELQ04864 619 aaPredicted RBP15.97■□□□□ 0.15
SOX2-201ENST00000325404 BSPH1Q075Z2 132 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 TSKUQ8WUA8 353 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 FAM168AQ92567 244 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 LINC00479Q96M42 142 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 RCHY1Q96PM5 261 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 EPDR1Q9UM22 224 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 PAM16Q9Y3D7 125 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 OR2J3O76001 311 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 KRTDAPP60985 99 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 C10orf55Q5SWW7 151 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 LINC00305Q7Z4B0 112 aa15.97■□□□□ 0.15
SOX2-201ENST00000325404 CTRLP40313 264 aa15.96■□□□□ 0.15
SOX2-201ENST00000325404 DIAPH2-AS1Q14236 149 aa15.96■□□□□ 0.15
SOX2-201ENST00000325404 TNFRSF19Q9NS68 423 aa15.96■□□□□ 0.15
SOX2-201ENST00000325404 IGLC7A0M8Q6 106 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms