RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 YTHDC2Q9H6S0 1430 aaKnown RBP1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 DENND4BO75064 1496 aaPredicted RBP1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 ZNF518AQ6AHZ1 1483 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 CLASP1Q7Z460 1538 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 DIP2AQ14689 1571 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 TTC37Q6PGP7 1564 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 TRPM1Q7Z4N2 1603 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 CC2D2AQ9P2K1 1620 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 BIVM-ERCC5R4GMW8 1640 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 SPHKAPQ2M3C7 1700 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 SUPT6HQ7KZ85 1726 aaKnown RBP1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 ABCA3Q99758 1704 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 LAMB4A4D0S4 1761 aa1.03□□□□□ -2.24
CBX3P1-201ENST00000325243 FOCADQ5VW36 1801 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 XIRP1Q702N8 1843 aaKnown RBP1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 SLX4Q8IY92 1834 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 RALGAPA2Q2PPJ7 1873 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 TRPM7Q96QT4 1865 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 EXPH5Q8NEV8 1989 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 TRPM6Q9BX84 2022 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 MED12LQ86YW9 2145 aa1.03□□□□□ -2.25
CBX3P1-201ENST00000325243 TRAV9-1A0A075B6T8 112 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 TRAV4A0A0B4J268 109 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 A0A1W2PNM2 257 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 A0A1W2PNN7 141 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 A0A1W2PQD3 144 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 C11orf86A6NJI1 115 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 G3V2T6 193 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 TRAPPC2LH3BP13 241 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 H3BT86 120 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 SEC16AO15027 2179 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 KDM6AO15550 1401 aaPredicted RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 OR2J2O76002 312 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ADGRL1O94910 1474 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ADGRL2O95490 1459 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 CRHP06850 196 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 EPRSP07814 1512 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 LGALS1P09382 135 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 LCTP09848 1927 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ZNF728P0DKX0 622 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 GZMBP10144 247 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 CBR1P16152 277 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 LGALS3P17931 250 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BOP23527 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BBP33778 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 GLRXP35754 106 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 XCL1P47992 114 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 SRP9P49458 86 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 RBP2P50120 134 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 FXYD7P58549 80 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BDP58876 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 TAS2R20P59543 309 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 RHOBP62745 196 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BCP62807 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 CACNA1DQ01668 2161 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ZNF846Q147U1 533 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST2H2BEQ16778 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HSD17B12Q53GQ0 312 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 PYDC2Q56P42 97 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 SAMD9Q5K651 1589 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 IBA57Q5T440 356 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 CCDC18Q5T9S5 1454 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ZFAND6Q6FIF0 208 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 Q6Q795 121 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 CCDC141Q6ZP82 1450 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 KDM3BQ7LBC6 1761 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 RBBP6Q7Z6E9 1792 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 NALCNQ8IZF0 1738 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ARHGEF28Q8N1W1 1705 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 EHBP1L1Q8N3D4 1523 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 STX19Q8N4C7 294 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 TMEM35BQ8NCS4 154 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 OR10K1Q8NGX5 313 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 S100ZQ8WXG8 99 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 SLC7A6Q92536 515 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BHQ93079 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ATG2BQ96BY7 2078 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ARAP1Q96P48 1450 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 IMMP2LQ96T52 175 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BNQ99877 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HIST1H2BMQ99879 126 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 AIF1LQ9BQI0 150 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 C2orf88Q9BSF0 95 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 C20orf27Q9GZN8 174 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 AICDAQ9GZX7 198 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 ANAPC1Q9H1A4 1944 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 MIXL1Q9H2W2 232 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 NIT2Q9NQR4 276 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 UGGT2Q9NYU1 1516 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 SCN11AQ9UI33 1791 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 NRXN1Q9ULB1 1477 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 MED23Q9ULK4 1368 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 BAIAP2Q9UQB8 552 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 MARF1Q9Y4F3 1742 aaKnown RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 AMMECR1Q9Y4X0 333 aaPredicted RBP1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 NUBP2Q9Y5Y2 271 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 HSPE1-MOB4S4R3N1 261 aa1.02□□□□□ -2.25
CBX3P1-201ENST00000325243 KIAA2026Q5HYC2 2103 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms