RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
PRPF3-201ENST00000324862 OR4X1Q8NH49 305 aa11.84□□□□□ -0.51
PRPF3-201ENST00000324862 ZNF502Q8TBZ5 544 aa11.84□□□□□ -0.51
PRPF3-201ENST00000324862 ANKRD34BA5PLL1 514 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 IGKV1-17P01599 117 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 C4BPBP20851 252 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 ADMP35318 185 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 FHITP49789 147 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 GON7Q9BXV9 100 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 GNB4Q9HAV0 340 aa11.83□□□□□ -0.52
PRPF3-201ENST00000324862 CYB5BO43169 146 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 CLN5O75503 358 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 ZNF680Q8NEM1 530 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 BPIFCQ8NFQ6 507 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 GNG7O60262 68 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 CTSGP08311 255 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 SPP1P10451 314 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 CD28P10747 220 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 MFAP4P55083 255 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 OR2G3Q8NGZ4 309 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 WIPF2Q8TF74 440 aaPredicted RBP11.82□□□□□ -0.52
PRPF3-201ENST00000324862 SLA2Q9H6Q3 261 aa11.82□□□□□ -0.52
PRPF3-201ENST00000324862 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 ZNF414Q96IQ9 312 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 FNDC10F2Z333 226 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 H3BUA1 57 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 FOXE3Q13461 319 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 STPG3Q8N7X2 389 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 ZNF491Q8N8L2 437 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 THAP8Q8NA92 274 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 EEF1AKMT3Q96AZ1 226 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
PRPF3-201ENST00000324862 SCAF4O95104 1147 aaKnown RBP11.8□□□□□ -0.52
PRPF3-201ENST00000324862 NDUFA7O95182 113 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 OR4X2Q8NGF9 303 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 DOK5Q9P104 306 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 PXMP4Q9Y6I8 212 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 TCRBV4S1A1TA0A5B7 111 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 ELANEP08246 267 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 LINC00869P0C866 280 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 PSG1P11464 419 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 NPBWR1P48145 328 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 PROK1P58294 105 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 CYP2G1PQ6ZSU1 146 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 DUX3Q96PT4 197 aa11.8□□□□□ -0.52
PRPF3-201ENST00000324862 PARD6GQ9BYG4 376 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-201ENST00000324862 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 CLPSL1A2RUU4 121 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 YIF1AO95070 293 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 BRI3O95415 125 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 RAB2AP61019 212 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 B2MP61769 119 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 FFAR4Q5NUL3 377 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 ZNF709Q8N972 641 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
PRPF3-201ENST00000324862 CITED2Q99967 270 aaPredicted RBP11.79□□□□□ -0.52
PRPF3-201ENST00000324862 PRR20EP86478 221 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 PRR20CP86479 221 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 PRR20DP86480 221 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 PRR20BP86481 221 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 PRR20AP86496 221 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 GNPNAT1Q96EK6 184 aaPredicted RBP11.78□□□□□ -0.52
PRPF3-201ENST00000324862 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 MPDU1O75352 247 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
PRPF3-201ENST00000324862 KRTAP24-1Q3LI83 254 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 TRGV9Q99603 122 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 RPRMQ9NS64 109 aa11.78□□□□□ -0.52
PRPF3-201ENST00000324862 A0A0G2JLM5 398 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 HMGB3O15347 200 aaKnown RBP11.77□□□□□ -0.52
PRPF3-201ENST00000324862 TGOLN2O43493 480 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 OR2C1O95371 312 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 ZNF616Q08AN1 781 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 SSX7Q7RTT5 188 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 RCC1LQ96I51 464 aaKnown RBP11.77□□□□□ -0.52
PRPF3-201ENST00000324862 UHRF2Q96PU4 802 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 PBDC1Q9BVG4 233 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 SLC39A9Q9NUM3 307 aa11.77□□□□□ -0.52
PRPF3-201ENST00000324862 TRRAPQ9Y4A5 3859 aa11.77□□□□□ -0.53
PRPF3-201ENST00000324862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
PRPF3-201ENST00000324862 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.53
PRPF3-201ENST00000324862 RD3LP0DJH9 198 aa11.77□□□□□ -0.53
PRPF3-201ENST00000324862 ORM2P19652 201 aa11.77□□□□□ -0.53
PRPF3-201ENST00000324862 ARL3P36405 182 aa11.77□□□□□ -0.53
PRPF3-201ENST00000324862 RAB31Q13636 194 aa11.77□□□□□ -0.53
PRPF3-201ENST00000324862 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
PRPF3-201ENST00000324862 PSMG3Q9BT73 122 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms