RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PHLDA1Q8WV24 401 aaPredicted RBP6.65□□□□□ -1.34
CIITA-201ENST00000324288 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.34
CIITA-201ENST00000324288 SBF1O95248 1867 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 A0A087WV48 116 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 EREGO14944 169 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 NBEAP1P0C6P0 100 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 NSUN5P1Q3KNT7 163 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 LRTM2Q8N967 370 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 FAM90A26D6RGX4 464 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 PLSCR4Q9NRQ2 329 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 ERG28Q9UKR5 140 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 EXPH5Q8NEV8 1989 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 CD8AP01732 235 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 EGR4Q05215 589 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 FAM181AQ8N9Y4 354 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 FER1L6-AS1Q8NA97 138 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 YAE1D1Q9NRH1 226 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 STRCP1A6NGW2 1772 aa6.65□□□□□ -1.34
CIITA-201ENST00000324288 TRAV30A0A087WSZ9 112 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 A0A0G2JMM0 328 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 A0A1W2PPB8 328 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 KIR3DP1A8MWS1 328 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 OCC1Q8TAD7 63 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 SIPA1L3O60292 1781 aaPredicted RBP6.65□□□□□ -1.35
CIITA-201ENST00000324288 LOC285556D6RIA3 1793 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 DLEU1O43261 78 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 EPDR1Q9UM22 224 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 GGTLC3B5MD39 225 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 C4orf51C9J302 202 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 CXorf51AA0A1B0GTR3 108 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 CELA3BP08861 270 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 GPX4P36969 197 aaPredicted RBP6.65□□□□□ -1.35
CIITA-201ENST00000324288 TMEM256Q8N2U0 113 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 IFI27L1Q96BM0 104 aa6.65□□□□□ -1.35
CIITA-201ENST00000324288 A0A0G2JLM5 398 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 CYSLTR1Q9Y271 337 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 BSPH1Q075Z2 132 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 PAPPA-AS1Q5QFB9 102 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 ARPC1AQ92747 370 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 PYYP10082 97 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 NR2C2APQ86WQ0 139 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 GTF3AQ92664 365 aaKnown RBP6.64□□□□□ -1.35
CIITA-201ENST00000324288 CD33P20138 364 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 LTBRP36941 435 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 FAM216BQ8N7L0 139 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 PILRBQ9UKJ0 227 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 TMEM131Q92545 1883 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 A0A1B0GUS0 222 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 ATXN8Q156A1 80 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 COLQQ9Y215 455 aaPredicted RBP6.64□□□□□ -1.35
CIITA-201ENST00000324288 IGKV1D-42A0A075B6H8 117 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 DXOO77932 396 aaKnown RBP6.64□□□□□ -1.35
CIITA-201ENST00000324288 HEPN1Q6WQI6 88 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 ZNF525Q8N782 197 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 MUC6Q6W4X9 2439 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 CD7P09564 240 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 ST20Q9HBF5 79 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 FOXD3Q9UJU5 478 aaPredicted RBP6.64□□□□□ -1.35
CIITA-201ENST00000324288 ZNF146Q15072 292 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 PPP1R27Q86WC6 154 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 SLC25A45Q8N413 288 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 A0A0G2JK05 382 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 AHRRA9YTQ3 701 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 ZXDCQ2QGD7 858 aaPredicted RBP6.64□□□□□ -1.35
CIITA-201ENST00000324288 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 C18orf12Q96KH6 178 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 SEPSECSQ9HD40 501 aaKnown RBP6.64□□□□□ -1.35
CIITA-201ENST00000324288 COX6A1P12074 109 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 RAB9AP51151 201 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 ASCL2Q99929 193 aa6.64□□□□□ -1.35
CIITA-201ENST00000324288 LRP5O75197 1615 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 M0R2P5 195 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 ANKHD1Q8IWZ3 2542 aaKnown RBP6.63□□□□□ -1.35
CIITA-201ENST00000324288 UBE2V1Q13404 147 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 FHL5Q5TD97 284 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 A0A087WWC5 75 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 HSD52Q0P140 79 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 BCL6BQ8N143 479 aaPredicted RBP6.63□□□□□ -1.35
CIITA-201ENST00000324288 RSPO3Q9BXY4 272 aaPredicted RBP6.63□□□□□ -1.35
CIITA-201ENST00000324288 VSIRQ9H7M9 311 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 TMEM74BQ9NUR3 256 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 EPOPA6NHQ4 379 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 GFRA3O60609 400 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 SEC11AP67812 179 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 OR52E5Q8NH55 327 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 KCNK17Q96T54 332 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 H7C1H1 209 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 ZNF138P52744 262 aa6.63□□□□□ -1.35
CIITA-201ENST00000324288 NXT2Q9NPJ8 142 aaKnown RBP6.62□□□□□ -1.35
CIITA-201ENST00000324288 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 RFPL3SP0C7P2 107 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 FAM90A2PQ658T7 463 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 SLC25A20O43772 301 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 CD28P10747 220 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 CDKN1AP38936 164 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms