RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PAPPA-AS1Q5QFB9 102 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 ZNF497Q6ZNH5 498 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 APELAP0DMC3 54 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 IFITM1P13164 125 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 TMEM196Q5HYL7 178 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 GGTLC1Q9BX51 225 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 THSD7BQ9C0I4 1608 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 FOXS1O43638 330 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 TIAF1O95411 115 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 GPR82Q96P67 336 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 LYZL6O75951 148 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 PLAUP00749 431 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 RPRMLQ8N4K4 120 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 CFHR5Q9BXR6 569 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 MOSP00540 346 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 PRDX2P32119 198 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 EPDR1Q9UM22 224 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 TRGV5A0A0B4J1U4 118 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 A0A1W2PPM0 123 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 PF4V1P10720 104 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 GAGE5Q13069 117 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 GAGE6Q13070 117 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 PSG3Q16557 428 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 NRN1LQ496H8 165 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 C9orf50Q5SZB4 431 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 DGAT2L7PQ6IED9 249 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 TOMM40O96008 361 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 BOD1L2Q8IYS8 172 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 RPP25LQ8N5L8 163 aaKnown RBP5.92□□□□□ -1.46
SMC1A-201ENST00000322213 SARAFQ96BY9 339 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 NCOR2Q9Y618 2525 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 BHLHA15Q7RTS1 189 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-201ENST00000322213 Q9H3A6 140 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 GP6Q9HCN6 339 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 C15orf61A6NNL5 157 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 IL18BPO95998 194 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 IGFBP2P18065 325 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 DEFB127Q9H1M4 99 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 TRAV26-1A0A087WT03 109 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 FAM231BA6NCW3 169 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 BCL6BQ8N143 479 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-201ENST00000322213 GFRA4Q9GZZ7 299 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 PRSS2P07478 247 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 INO80CQ6PI98 192 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-201ENST00000322213 IGHV1OR21-1A0A087WYE8 117 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 CRYBA4P53673 196 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 LAGE3Q14657 143 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 SCGB3A1Q96QR1 104 aa5.92□□□□□ -1.46
SMC1A-201ENST00000322213 NBEAP1P0C6P0 100 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 IGLV3-21P80748 117 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-201ENST00000322213 JPT1Q9UK76 154 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 hCG_38984A0A1B0GV85 526 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 IFI27L1Q96BM0 104 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 KLK15Q9H2R5 256 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 C22orf46C9J442 243 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 LYPD3O95274 346 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 REG1AP05451 166 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 CD33P20138 364 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 KLF17Q5JT82 389 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-201ENST00000322213 INSIG2Q9Y5U4 225 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 G3V4G9 280 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 CELA2BP08218 269 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-201ENST00000322213 VSIRQ9H7M9 311 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 IGHV3OR15-7A0A075B7D8 119 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 IGHV4-39P01824 125 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 ATXN8Q156A1 80 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 SCARF2Q96GP6 870 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-201ENST00000322213 TRBV20-1A0A075B6N2 111 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 IFNL4K9M1U5 179 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 NKX2-8O15522 239 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 CCL7P80098 99 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 MDP1Q86V88 176 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 ABHD12Q8N2K0 398 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 CRXO43186 299 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-201ENST00000322213 SSBP2P81877 361 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-201ENST00000322213 MIR17HGQ75NE6 70 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 OR10J6PQ8NGY7 276 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 TMUB1Q9BVT8 246 aa5.91□□□□□ -1.46
SMC1A-201ENST00000322213 NPIPB11E5RHQ5 1161 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 MGST3O14880 152 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 VEGFBP49765 207 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 MESP2Q0VG99 397 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 WDR82Q6UXN9 313 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 USP9YO00507 2555 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-201ENST00000322213 K7EQS6 105 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 LINC00271P0C7V0 271 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 UBALD2Q8IYN6 164 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 MPV17P39210 176 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 TMEM170BQ5T4T1 132 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 SPINK14Q6IE38 97 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 C1QTNF5Q9BXJ0 243 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 RNF115Q9Y4L5 304 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 J3QW42 95 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.46
SMC1A-201ENST00000322213 CCL3P10147 92 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 LILRA6Q6PI73 481 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 SMIM20Q8N5G0 67 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 SS18L2Q9UHA2 77 aa5.9□□□□□ -1.46
SMC1A-201ENST00000322213 COX8AP10176 69 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms