RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 IGKV1D-39P04432 117 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 CD40P25942 277 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 FOXL2NBQ6ZUU3 175 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 ADTRPQ96IZ2 230 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 MORN2Q502X0 79 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 MRPL20Q9BYC9 149 aaKnown RBP12.61□□□□□ -0.39
VARS2-201ENST00000321897 USP34Q70CQ2 3546 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.6□□□□□ -0.39
VARS2-201ENST00000321897 A8MWL6 223 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 GNG5P63218 68 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 HAPLN4Q86UW8 402 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 A0A1W2PN81 502 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 ZNF138P52744 262 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 MDS2Q8NDY4 140 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 CLEC7AQ9BXN2 247 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 IDI2-AS1Q9NZ38 188 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 JPT1Q9UK76 154 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 RNF115Q9Y4L5 304 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 EML5Q05BV3 1969 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 FOXL1Q12952 345 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 GCSAMQ8N6F7 178 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
VARS2-201ENST00000321897 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
VARS2-201ENST00000321897 USP9XQ93008 2570 aaPredicted RBP12.6□□□□□ -0.39
VARS2-201ENST00000321897 IGHV3OR16-10A0A075B7F0 116 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 IGHV3-23P01764 117 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 WT1P19544 449 aaPredicted RBP12.59□□□□□ -0.39
VARS2-201ENST00000321897 DUTP33316 252 aaKnown RBP12.59□□□□□ -0.39
VARS2-201ENST00000321897 FAM90A1Q86YD7 464 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 LINC00479Q96M42 142 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 C20orf144Q9BQM9 153 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 ZNF430Q9H8G1 570 aaPredicted RBP12.59□□□□□ -0.39
VARS2-201ENST00000321897 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
VARS2-201ENST00000321897 CGB1A6NKQ9 187 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 DKK1O94907 266 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 WDR83OSQ9Y284 106 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 PYYP10082 97 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 COLCA1Q6ZS62 124 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 C5orf17Q8NAS9 161 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 THYN1Q9P016 225 aa12.59□□□□□ -0.39
VARS2-201ENST00000321897 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
VARS2-201ENST00000321897 TRBV9A0A0B4J1U6 114 aa12.58□□□□□ -0.39
VARS2-201ENST00000321897 OR2T8A6NH00 312 aa12.58□□□□□ -0.39
VARS2-201ENST00000321897 EFNB3Q15768 340 aa12.58□□□□□ -0.39
VARS2-201ENST00000321897 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 FABP2P12104 132 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 TMEM14EPQ6UXP3 125 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 SORL1Q92673 2214 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 TIMM23BQ5SRD1 257 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 CDC42EP3Q9UKI2 254 aa12.58□□□□□ -0.4
VARS2-201ENST00000321897 TRAV5A0A0B4J249 113 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
VARS2-201ENST00000321897 SMAGPQ0VAQ4 97 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 Q6ZR03 302 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 TANC2Q9HCD6 1990 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 PRRX1P54821 245 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 ZNF146Q15072 292 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 SRSF12Q8WXF0 261 aaKnown RBP12.57□□□□□ -0.4
VARS2-201ENST00000321897 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 COX11Q9Y6N1 276 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 SS18L1O75177 396 aaPredicted RBP12.57□□□□□ -0.4
VARS2-201ENST00000321897 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 VSTM2AQ8TAG5 236 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 C7orf71A4D174 169 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 IGLC3P0DOY3 106 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 LMO1P25800 156 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 NEUROG1Q92886 237 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 GGTLC1Q9BX51 225 aa12.57□□□□□ -0.4
VARS2-201ENST00000321897 KBTBD11-OT1A0A1B0GTJ5 212 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 CCL25O15444 150 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 CIDEAO60543 219 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 FXYD7P58549 80 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 UBTD1Q9HAC8 227 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 AP5S1Q9NUS5 200 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 SAA1P0DJI8 122 aaPredicted RBP12.56□□□□□ -0.4
VARS2-201ENST00000321897 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 IGKV1D-17A0A075B6S4 117 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 IGLV3-1P01715 115 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 IGKV1-16P04430 117 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 TBR1Q16650 682 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 ASCL2Q99929 193 aa12.56□□□□□ -0.4
VARS2-201ENST00000321897 A0A1W2PS18 150 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 SCGB2A1O75556 95 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms