RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TRAV14DV4A0A0A6YYC5 116 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 IGKV3D-20A0A0C4DH25 116 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 A0A1W2PQF6 199 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 CD28P10747 220 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 GP6Q9HCN6 339 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 C12orf77C9JDV5 145 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 TSKUQ8WUA8 353 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 EPDR1Q9UM22 224 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 IGHV3-49A0A0A0MS15 119 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 PVRIGQ6DKI7 326 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 CACNA1HO95180 2353 aa14.18□□□□□ -0.14
SMCHD1-201ENST00000320876 TMEM144Q7Z5S9 345 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 HIST3H2BBQ8N257 126 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 A0A1B0GTI1 187 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 PPP1R27Q86WC6 154 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 FGF11Q92914 225 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 PEMTQ9UBM1 199 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 TMEM167AQ8TBQ9 72 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 DPM3Q9P2X0 92 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 TCRBV4S1A1TA0A5B7 111 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 CRYBA2P53672 197 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 MRPL20Q9BYC9 149 aaKnown RBP14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 GLRXP35754 106 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 HIST1H4AP62805 103 aaKnown RBP14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 A6NNC1 897 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 SSBP2P81877 361 aaPredicted RBP14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 SLC25A48Q6ZT89 311 aaKnown RBP14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
SMCHD1-201ENST00000320876 GNG5P63218 68 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 IFI27L1Q96BM0 104 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 RAMP3O60896 148 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 GZMBP10144 247 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 EDA2RQ9HAV5 297 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 TNFRSF6BO95407 300 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 FOXD3Q9UJU5 478 aaPredicted RBP14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 A0A1W2PRE2 83 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 APOBEC3AP31941 199 aaPredicted RBP14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 TIMP3P35625 211 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 SRSF3P84103 164 aaKnown RBP14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 CST9LQ9H4G1 147 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 EVI2AP22794 236 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 DTX2Q86UW9 622 aa14.16□□□□□ -0.14
SMCHD1-201ENST00000320876 ZIC4Q8N9L1 334 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 C1QTNF5Q9BXJ0 243 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 FBXL15Q9H469 300 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 PROB1E7EW31 1015 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 C1QL2Q7Z5L3 287 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 RNF126Q9BV68 326 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 NAPSAO96009 420 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 CLEC19AQ6UXS0 136 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 C1orf162Q8NEQ5 155 aaPredicted RBP14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 SAA2-SAA4A0A096LPE2 208 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 CDK2AP2O75956 126 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 C1QTNF9P0C862 333 aa14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 SAA2P0DJI9 122 aaPredicted RBP14.15□□□□□ -0.14
SMCHD1-201ENST00000320876 GFRA3O60609 400 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 ACTL10Q5JWF8 245 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 HCFC1P51610 2035 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 RNF125Q96EQ8 232 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 ZNHIT1O43257 154 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 FOXL1Q12952 345 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 TEX38Q6PEX7 206 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 DTX1Q86Y01 620 aa14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 CITED2Q99967 270 aaPredicted RBP14.14□□□□□ -0.15
SMCHD1-201ENST00000320876 FAM90A2PQ658T7 463 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 C19orf48Q6RUI8 117 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 A0A1B0GW64 132 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 A0A0G2JK05 382 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 EFNB3Q15768 340 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 C1orf194Q5T5A4 169 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 TPTE2P1Q5T6R2 138 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 ZNF497Q6ZNH5 498 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 S4R3C0 116 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 TRGV11A0A075B6L2 103 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 NBR2O15453 112 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 AMBPP02760 352 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 EIF4EBP2Q13542 120 aaPredicted RBP14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 LAIR2Q6ISS4 152 aa14.13□□□□□ -0.15
SMCHD1-201ENST00000320876 TOMM40O96008 361 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 TRBV24-1A0A075B6N3 115 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 PLCE1Q9P212 2302 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 TDGF1P3P51864 188 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 NBASA2RRP1 2371 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 BTCP35070 178 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 TRBV6-7A0A0A0MS04 114 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 YPEL1O60688 119 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 YPEL2Q96QA6 119 aa14.12□□□□□ -0.15
SMCHD1-201ENST00000320876 CD5P06127 495 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 SMIM10L1P0DMW3 83 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 SMIM10Q96HG1 83 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 GAGE12BA1L429 117 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 ITGB1BP1O14713 200 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 IGFBP3P17936 291 aaPredicted RBP14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 STHQ8IWL8 128 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 SPAARA0A1B0GVQ0 90 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 C4orf51C9J302 202 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 FOXL2P58012 376 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 IL9P15248 144 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 MPZP25189 248 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms