RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FCGR2BP31994 310 aaPredicted RBP10.46□□□□□ -0.73
RPP40-201ENST00000319533 SNCAP37840 140 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 HOXA1P49639 335 aaPredicted RBP10.46□□□□□ -0.73
RPP40-201ENST00000319533 CMC4P56277 68 aaPredicted RBP10.46□□□□□ -0.73
RPP40-201ENST00000319533 Q56UQ5 140 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 SPINK9Q5DT21 86 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 TMEM268Q5VZI3 342 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 GLYATL2Q8WU03 294 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 GATAD1Q8WUU5 269 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 TMEM230Q96A57 120 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
RPP40-201ENST00000319533 AKR1C4P17516 323 aa10.45□□□□□ -0.74
RPP40-201ENST00000319533 SUB1P53999 127 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPP40-201ENST00000319533 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
RPP40-201ENST00000319533 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
RPP40-201ENST00000319533 IL22RA2Q969J5 263 aa10.45□□□□□ -0.74
RPP40-201ENST00000319533 PINX1Q96BK5 328 aaKnown RBP10.45□□□□□ -0.74
RPP40-201ENST00000319533 OR10C1Q96KK4 312 aa10.45□□□□□ -0.74
RPP40-201ENST00000319533 SLC25A21Q9BQT8 299 aaPredicted RBP10.45□□□□□ -0.74
RPP40-201ENST00000319533 CSTL1Q9H114 145 aa10.45□□□□□ -0.74
RPP40-201ENST00000319533 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.45□□□□□ -0.74
RPP40-201ENST00000319533 TMEM56-RWDD3S4R434 201 aa10.45□□□□□ -0.74
RPP40-201ENST00000319533 PIGBOS1A0A0B4J2F0 54 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 A0A0G2JRQ6 117 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 CHEK1O14757 476 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 ZNF207O43670 478 aaKnown RBP10.44□□□□□ -0.74
RPP40-201ENST00000319533 DEDDO75618 318 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 SRPXP78539 464 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 TMED4Q7Z7H5 227 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 APRG1Q8IVJ8 170 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 RNF2Q99496 336 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 SEC22CQ9BRL7 303 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 C11orf68Q9H3H3 251 aaKnown RBP10.44□□□□□ -0.74
RPP40-201ENST00000319533 CACFD1Q9UGQ2 172 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 ALG5Q9Y673 324 aa10.44□□□□□ -0.74
RPP40-201ENST00000319533 IGHV3OR16-8A0A075B7F1 116 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 MPTX1A8MV57 137 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 I3L2K1 104 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 CORTO00230 105 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 NUPL2O15504 423 aaKnown RBP10.43□□□□□ -0.74
RPP40-201ENST00000319533 MT-CO2P00403 227 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 MFAP4P55083 255 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 SPCS3P61009 180 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 RELQ04864 619 aaPredicted RBP10.43□□□□□ -0.74
RPP40-201ENST00000319533 TMEM187Q14656 261 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 TMEM116Q8NCL8 245 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 OR52E5Q8NH55 327 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 TXN2Q99757 166 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 MFFQ9GZY8 342 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
RPP40-201ENST00000319533 C7orf66A4D0T2 115 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 ZNF124Q15973 351 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 AARDQ4LEZ3 155 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
RPP40-201ENST00000319533 Q6ZRM9 215 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 LGI3Q8N145 548 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 GPR146Q96CH1 333 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 RARRES2Q99969 163 aa10.42□□□□□ -0.74
RPP40-201ENST00000319533 A0A0B4J2A0 478 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 CEBPZOSA8MTT3 80 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 GNG7O60262 68 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 TCTAP57738 103 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 SUPT4H1P63272 117 aaKnown RBP10.41□□□□□ -0.74
RPP40-201ENST00000319533 PPP1R1AQ13522 171 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 TMEM128Q5BJH2 165 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 C11orf45Q8TAV5 145 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 HEYLQ9NQ87 328 aaPredicted RBP10.41□□□□□ -0.74
RPP40-201ENST00000319533 PRR13Q9NZ81 148 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 SHPKQ9UHJ6 478 aa10.41□□□□□ -0.74
RPP40-201ENST00000319533 FAT2Q9NYQ8 4349 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 KIAA1109Q2LD37 5005 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 TRAV14DV4A0A0A6YYC5 116 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 SCGB2A1O75556 95 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 YIF1AO95070 293 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 IGHV3-48P01763 117 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 IL5P05113 134 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 CD5P06127 495 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 RNASE2P10153 161 aaKnown RBP10.4□□□□□ -0.74
RPP40-201ENST00000319533 VAMP1P23763 118 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 HTR2BP41595 481 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 NPBWR1P48145 328 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.74
RPP40-201ENST00000319533 UBE2MP61081 183 aaKnown RBP10.4□□□□□ -0.74
RPP40-201ENST00000319533 OR11H2Q8NH07 326 aa10.4□□□□□ -0.74
RPP40-201ENST00000319533 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 IFNA4P05014 189 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 OR4E1P0C645 316 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 OPRK1P41145 380 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 BCAP31P51572 246 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 SMCO1Q147U7 214 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 PVRIGQ6DKI7 326 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 VSIRQ9H7M9 311 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms