RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 IFNA4P05014 189 aa11.98□□□□□ -0.49
HDDC2-201ENST00000318787 IAPPP10997 89 aa11.98□□□□□ -0.49
HDDC2-201ENST00000318787 LINC00322Q6ZN03 302 aaPredicted RBP11.98□□□□□ -0.49
HDDC2-201ENST00000318787 NOXA1Q86UR1 476 aa11.98□□□□□ -0.49
HDDC2-201ENST00000318787 RNASEH2CQ8TDP1 164 aaKnown RBP11.98□□□□□ -0.49
HDDC2-201ENST00000318787 NDUFA13Q9P0J0 144 aa11.98□□□□□ -0.49
HDDC2-201ENST00000318787 HSPB7Q9UBY9 170 aa11.98□□□□□ -0.49
HDDC2-201ENST00000318787 TRAV30A0A087WSZ9 112 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 CENPXA8MT69 81 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
HDDC2-201ENST00000318787 LYL1P12980 280 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 RPL35AP18077 110 aaKnown RBP11.97□□□□□ -0.49
HDDC2-201ENST00000318787 NPPCP23582 126 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 OR10J1P30954 320 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 ODF3L2Q3SX64 289 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 ETFRF1Q6IPR1 90 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 PRSS54Q6PEW0 395 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 APRG1Q8IVJ8 170 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 TMEM170AQ8WVE7 144 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 NARS2Q96I59 477 aaKnown RBP11.97□□□□□ -0.49
HDDC2-201ENST00000318787 METTL26Q96S19 204 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 FLVCR2Q9UPI3 526 aa11.97□□□□□ -0.49
HDDC2-201ENST00000318787 DUXBA0A1W2PPF3 345 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 DFFBO76075 338 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 SLC25A4P12235 298 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 PAFAH1B2P68402 229 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 OR1S2Q8NGQ3 325 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 NPIPB3Q92617 1050 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 RABAC1Q9UI14 185 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 U3KQ87 197 aa11.96□□□□□ -0.49
HDDC2-201ENST00000318787 IGKV1-17P01599 117 aa11.95□□□□□ -0.5
HDDC2-201ENST00000318787 IL7P13232 177 aa11.95□□□□□ -0.5
HDDC2-201ENST00000318787 ZNF124Q15973 351 aa11.95□□□□□ -0.5
HDDC2-201ENST00000318787 STXBP6Q8NFX7 210 aa11.95□□□□□ -0.5
HDDC2-201ENST00000318787 Q8WTZ3 238 aa11.95□□□□□ -0.5
HDDC2-201ENST00000318787 SDHCQ99643 169 aaPredicted RBP11.95□□□□□ -0.5
HDDC2-201ENST00000318787 MAGT1Q9H0U3 335 aa11.95□□□□□ -0.5
HDDC2-201ENST00000318787 A0A1W2PS18 150 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 NDUFB6O95139 128 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 IGLC1P0CG04 106 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 APOC4P55056 127 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 CASC10Q5T4H9 136 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 GGNBP1Q5YKI7 109 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 LILRB2Q8N423 598 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 EDA2RQ9HAV5 297 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 TMED3Q9Y3Q3 217 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
HDDC2-201ENST00000318787 C9orf170A2RU37 121 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 WRBO00258 174 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 ADAP1O75689 374 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 IL4P05112 153 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
HDDC2-201ENST00000318787 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-201ENST00000318787 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 MS4A6AQ9H2W1 248 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
HDDC2-201ENST00000318787 ZFP92A6NM28 416 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 MED6O75586 246 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 P2RY1P47900 373 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 UBE2MP61081 183 aaKnown RBP11.92□□□□□ -0.5
HDDC2-201ENST00000318787 RAB11AP62491 216 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 H3BP45 60 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 PITX3O75364 302 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 CD5P06127 495 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 OR4E1P0C645 316 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 DHRS2Q13268 280 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 LEMD1Q68G75 181 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 C7orf50Q9BRJ6 194 aaKnown RBP11.92□□□□□ -0.5
HDDC2-201ENST00000318787 PBDC1Q9BVG4 233 aa11.92□□□□□ -0.5
HDDC2-201ENST00000318787 SYNGR2O43760 224 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 SCGB1D2O95969 90 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 IFNA21P01568 189 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 HNRNPCP07910 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDDC2-201ENST00000318787 RD3LP0DJH9 198 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 SLC25A6P12236 298 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 CRYBB3P26998 211 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 BTCP35070 178 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 CMC4P56277 68 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-201ENST00000318787 DEFB131AP59861 70 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 YPEL3P61236 119 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-201ENST00000318787 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-201ENST00000318787 SPANXN5Q5MJ07 72 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
HDDC2-201ENST00000318787 MPTX1A8MV57 137 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 FAM90A26D6RGX4 464 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 LYRM1O43325 122 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 TOMM40O96008 361 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 PSG1P11464 419 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 RPP30P78346 268 aaKnown RBP11.9□□□□□ -0.5
HDDC2-201ENST00000318787 FAM24BQ8N5W8 94 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms