RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SIGLEC9Q9Y336 463 aa16.5■□□□□ 0.23
TTC39C-202ENST00000317571 IGHV3-21A0A0B4J1V1 117 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 A0A1W2PRE2 83 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 SNRPCP09234 159 aaKnown RBP16.49■□□□□ 0.23
TTC39C-202ENST00000317571 UBE2L3P68036 154 aaKnown RBP16.49■□□□□ 0.23
TTC39C-202ENST00000317571 SSX2Q16385 188 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 ADMP35318 185 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 GNG4P50150 75 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 SUB1P53999 127 aaKnown RBP eCLIP16.49■□□□□ 0.23
TTC39C-202ENST00000317571 IGF2BP2-AS1Q96M15 143 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 NOL4LQ96MY1 436 aaPredicted RBP16.49■□□□□ 0.23
TTC39C-202ENST00000317571 INSIG2Q9Y5U4 225 aa16.49■□□□□ 0.23
TTC39C-202ENST00000317571 COX7A2P2O60397 106 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 RPL27AP46776 148 aaKnown RBP16.48■□□□□ 0.23
TTC39C-202ENST00000317571 ASPHD1Q5U4P2 390 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 BEND2Q8NDZ0 799 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 MISP3Q96FF7 219 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 LINC00479Q96M42 142 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 PRRX1P54821 245 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 KLRB1Q12918 225 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 C10orf113Q5VZT2 155 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 MMD2Q8IY49 270 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 C8orf46Q8TAG6 207 aa16.48■□□□□ 0.23
TTC39C-202ENST00000317571 RNASE7Q9H1E1 156 aaKnown RBP16.48■□□□□ 0.23
TTC39C-202ENST00000317571 TEX22C9J3V5 150 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 LY6LH3BQJ8 138 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 CBLN1P23435 193 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 COMPP49747 757 aaPredicted RBP16.47■□□□□ 0.23
TTC39C-202ENST00000317571 FCN1O00602 326 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 ERVFC1-1P60608 527 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 YPEL3P61236 119 aaPredicted RBP16.47■□□□□ 0.23
TTC39C-202ENST00000317571 NHLH1Q02575 133 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 FBXL15Q9H469 300 aa16.47■□□□□ 0.23
TTC39C-202ENST00000317571 RNF224P0DH78 156 aa16.46■□□□□ 0.23
TTC39C-202ENST00000317571 FXYD5Q96DB9 178 aa16.46■□□□□ 0.23
TTC39C-202ENST00000317571 GSX1Q9H4S2 264 aaPredicted RBP16.46■□□□□ 0.23
TTC39C-202ENST00000317571 SPTBN4Q9H254 2564 aa16.46■□□□□ 0.23
TTC39C-202ENST00000317571 GRIFINA4D1Z8 144 aa16.46■□□□□ 0.23
TTC39C-202ENST00000317571 LY6G5BQ8NDX9 201 aa16.46■□□□□ 0.23
TTC39C-202ENST00000317571 CSMD1Q96PZ7 3565 aa16.46■□□□□ 0.22
TTC39C-202ENST00000317571 ABCA1O95477 2261 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 FXYD3Q14802 87 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 FBLN7Q53RD9 439 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 PPP1R27Q86WC6 154 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 RNF2Q99496 336 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 NDUFAF3Q9BU61 184 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 PAXXQ9BUH6 204 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 TNFRSF19Q9NS68 423 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 ONECUT1Q9UBC0 465 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 IQCJQ1A5X6 159 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 LINC00305Q7Z4B0 112 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 NHLRC2Q8NBF2 726 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 COL6A6A6NMZ7 2263 aa16.45■□□□□ 0.22
TTC39C-202ENST00000317571 RBP4P02753 201 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 UCNP55089 124 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 OR8B3Q8NGG8 313 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 OR1L4Q8NGR5 311 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 RPEQ96AT9 228 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 OR8B2Q96RD0 313 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 ZNF329Q86UD4 541 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 TP53TG3Q9ULZ0 132 aa16.44■□□□□ 0.22
TTC39C-202ENST00000317571 SCGB1D1O95968 90 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 SELENOTP62341 195 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 C11orf71Q6IPW1 123 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 OR8I2Q8N0Y5 310 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 ORM2P19652 201 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 BPIFB3P59826 476 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 RPEL1Q2QD12 228 aa16.43■□□□□ 0.22
TTC39C-202ENST00000317571 RAB4BP61018 213 aa16.42■□□□□ 0.22
TTC39C-202ENST00000317571 TMEM116Q8NCL8 245 aa16.42■□□□□ 0.22
TTC39C-202ENST00000317571 F11RQ9Y624 299 aaKnown RBP16.42■□□□□ 0.22
TTC39C-202ENST00000317571 TIMM23O14925 209 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 MYCNOSP40205 109 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 LINC00310P59036 64 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 ARF6P62330 175 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 KLRD1Q13241 179 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 TIGITQ495A1 244 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 OR1B1Q8NGR6 318 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 SRSF12Q8WXF0 261 aaKnown RBP16.41■□□□□ 0.22
TTC39C-202ENST00000317571 C2orf88Q9BSF0 95 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 TRAV34A0A0B4J273 112 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 A0A1W2PPR1 153 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 TAS2R60P59551 318 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 OR1L6Q8NGR2 347 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 MS4A10Q96PG2 267 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 TRGV9Q99603 122 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 MRPL18Q9H0U6 180 aaKnown RBP16.41■□□□□ 0.22
TTC39C-202ENST00000317571 OSTCQ9NRP0 149 aa16.41■□□□□ 0.22
TTC39C-202ENST00000317571 TRAV9-1A0A075B6T8 112 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 LIPFP07098 398 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 GNG5P63218 68 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 CMTM2Q8TAZ6 248 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 POLR3KQ9Y2Y1 108 aaPredicted RBP16.4■□□□□ 0.22
TTC39C-202ENST00000317571 AMMECR1Q9Y4X0 333 aaPredicted RBP16.4■□□□□ 0.22
TTC39C-202ENST00000317571 SPINK4O60575 86 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 MGST1P10620 155 aaKnown RBP16.4■□□□□ 0.22
TTC39C-202ENST00000317571 IER3P46695 156 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 ETFRF1Q6IPR1 90 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 CDC42EP3Q9UKI2 254 aa16.4■□□□□ 0.22
TTC39C-202ENST00000317571 CA1P00915 261 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms