RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 Q6ZNX1 250 aa11.53□□□□□ -0.56
FOXR1-201ENST00000317011 OR1S1Q8NH92 325 aa11.53□□□□□ -0.56
FOXR1-201ENST00000317011 MED28Q9H204 178 aa11.53□□□□□ -0.56
FOXR1-201ENST00000317011 MGAT4CQ9UBM8 478 aa11.53□□□□□ -0.56
FOXR1-201ENST00000317011 hCG_2014768A0A024R1R8 64 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 KIR2DL5BA0A0G2JN68 375 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 KIR2DL5BA0A0G2JPC4 375 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 C5orf51A6NDU8 294 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 UBE2CO00762 179 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 CHEK1O14757 476 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 SIX6O95475 246 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 MT-CO2P00403 227 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 RELQ04864 619 aaPredicted RBP11.52□□□□□ -0.57
FOXR1-201ENST00000317011 Q56UQ5 140 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 KIR2DL5AQ8N109 375 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 KIR2DL5BQ8NHK3 375 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 PDCD10Q9BUL8 212 aa11.52□□□□□ -0.57
FOXR1-201ENST00000317011 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 A0A1B0GU03 582 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 NUPL2O15504 423 aaKnown RBP11.51□□□□□ -0.57
FOXR1-201ENST00000317011 ST8SIA3O43173 380 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 ERHP84090 104 aaKnown RBP11.51□□□□□ -0.57
FOXR1-201ENST00000317011 FCN2Q15485 313 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 IAH1Q2TAA2 248 aaPredicted RBP11.51□□□□□ -0.57
FOXR1-201ENST00000317011 SPINK9Q5DT21 86 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 GSG1LQ6UXU4 331 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 RNF2Q99496 336 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 C20orf24Q9BUV8 137 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
FOXR1-201ENST00000317011 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.51□□□□□ -0.57
FOXR1-201ENST00000317011 OR4C46A6NHA9 309 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
FOXR1-201ENST00000317011 SCGB1D2O95969 90 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 IFNA17P01571 189 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 SLC25A6P12236 298 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
FOXR1-201ENST00000317011 RRAS2P62070 204 aaPredicted RBP11.5□□□□□ -0.57
FOXR1-201ENST00000317011 TNFRSF9Q07011 255 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
FOXR1-201ENST00000317011 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 RNF183Q96D59 192 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 GSKIPQ9P0R6 139 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 UBQLN2Q9UHD9 624 aa11.5□□□□□ -0.57
FOXR1-201ENST00000317011 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 SPRY2O43597 315 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 CXCL3P19876 107 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 BMI1P35226 326 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 APOC4P55056 127 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 CMC4P56277 68 aaPredicted RBP11.49□□□□□ -0.57
FOXR1-201ENST00000317011 OR11H7Q8NGC8 314 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 VSIRQ9H7M9 311 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
FOXR1-201ENST00000317011 A0A1B0GVG6 124 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 PITX3O75364 302 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 TMEM50AO95807 157 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 HOXA1P49639 335 aaPredicted RBP11.48□□□□□ -0.57
FOXR1-201ENST00000317011 H2BFSP57053 126 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
FOXR1-201ENST00000317011 BSXQ3C1V8 233 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 TOMM20LQ6UXN7 152 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 LILRB2Q8N423 598 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 OR4D5Q8NGN0 318 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 C2orf50Q96LR7 162 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 MAGT1Q9H0U3 335 aa11.48□□□□□ -0.57
FOXR1-201ENST00000317011 CEBPZOSA8MTT3 80 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 JTBO76095 146 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 CD5P06127 495 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 RNASE2P10153 161 aaKnown RBP11.47□□□□□ -0.57
FOXR1-201ENST00000317011 NPBWR1P48145 328 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 RBKSQ9H477 322 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
FOXR1-201ENST00000317011 GNG7O60262 68 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 YIF1AO95070 293 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
FOXR1-201ENST00000317011 S100A10P60903 97 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 SPCS3P61009 180 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 STPG3Q8N7X2 389 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 OR52E5Q8NH55 327 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 FNDC4Q9H6D8 234 aaPredicted RBP11.46□□□□□ -0.57
FOXR1-201ENST00000317011 ZFAND3Q9H8U3 227 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 ENY2Q9NPA8 101 aa11.46□□□□□ -0.57
FOXR1-201ENST00000317011 A0A0J9YWU9 116 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 FAM90A26D6RGX4 464 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 WRBO00258 174 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 APOHP02749 345 aaPredicted RBP11.45□□□□□ -0.58
FOXR1-201ENST00000317011 SNCAP37840 140 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 POLR2GP62487 172 aaKnown RBP eCLIP11.45□□□□□ -0.58
FOXR1-201ENST00000317011 MLANAQ16655 118 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 ZNF600Q6ZNG1 722 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 APRG1Q8IVJ8 170 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 DTD1Q8TEA8 209 aa11.45□□□□□ -0.58
FOXR1-201ENST00000317011 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
FOXR1-201ENST00000317011 MRPL36Q9P0J6 103 aaKnown RBP11.45□□□□□ -0.58
FOXR1-201ENST00000317011 LSM5Q9Y4Y9 91 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms