RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 FAM215AQ9Y5M1 114 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 USP9YO00507 2555 aaPredicted RBP12.12□□□□□ -0.47
TFE3-201ENST00000315869 TRAV9-1A0A075B6T8 112 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 hADV38S2A0JD32 116 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 DPRXA6NFQ7 191 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 TCF21O43680 179 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 C3orf79P0CE67 100 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 HINT1P49773 126 aaPredicted RBP12.12□□□□□ -0.47
TFE3-201ENST00000315869 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 ZNF439Q8NDP4 499 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 OR1B1Q8NGR6 318 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 C20orf144Q9BQM9 153 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 SLC25A33Q9BSK2 321 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 OSTCQ9NRP0 149 aa12.12□□□□□ -0.47
TFE3-201ENST00000315869 M0R2Z0 102 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 DLEU1O43261 78 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 ZNF474Q6S9Z5 364 aaPredicted RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 KCNS1Q96KK3 526 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 SFXN3Q9BWM7 321 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 LPAR2Q9HBW0 351 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 FOXA3P55318 350 aaPredicted RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 CD69Q07108 199 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 SLAQ13239 276 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 SETD2Q9BYW2 2564 aaPredicted RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 RNASE2P10153 161 aaKnown RBP12.11□□□□□ -0.47
TFE3-201ENST00000315869 ZNF137PP52743 207 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 Q0VG73 95 aa12.11□□□□□ -0.47
TFE3-201ENST00000315869 SLC25A17O43808 307 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 COL5A1-AS1Q5SY13 56 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 IGHV1-46P01743 117 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 CD24P25063 80 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 AARDQ4LEZ3 155 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 ZNF835Q9Y2P0 537 aa12.1□□□□□ -0.47
TFE3-201ENST00000315869 ISLRO14498 428 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 SIAH2O43255 324 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 GAFA1Q96PS6 74 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
TFE3-201ENST00000315869 NKX6-3A6NJ46 265 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 E7EUB6 86 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 PPOXP50336 477 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 LEMD1Q68G75 181 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 Q6ZS92 163 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 C1orf174Q8IYL3 243 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 A0A1W2PN81 502 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 PGPA6NDG6 321 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 CEACAM4O75871 244 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 DIAPH2-AS1Q14236 149 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.09□□□□□ -0.47
TFE3-201ENST00000315869 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
TFE3-201ENST00000315869 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.47
TFE3-201ENST00000315869 A0A1W2PRE2 83 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 M0QZ24 198 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 CORTO00230 105 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 DLL1O00548 723 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 C19orf35Q6ZS72 473 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 Q6ZVH6 145 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 TCF24Q7RTU0 167 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 TSKUQ8WUA8 353 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 HIGD1CA8MV81 97 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 BPIFB3P59826 476 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 TNXAQ16473 311 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 TIMM23BQ5SRD1 257 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 CHODLQ9H9P2 273 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 UQCR10Q9UDW1 63 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 PEX7O00628 323 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 GUSBP1Q15486 140 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 LINC00305Q7Z4B0 112 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
TFE3-201ENST00000315869 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
TFE3-201ENST00000315869 IZUMO1RA6ND01 250 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 DLX1P56177 255 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 C2orf83Q53S99 150 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 RAXQ9Y2V3 346 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 CGB3P0DN86 165 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 CGB7P0DN87 165 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 SUB1P53999 127 aaKnown RBP eCLIP12.07□□□□□ -0.48
TFE3-201ENST00000315869 ERASQ7Z444 233 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 GAL3ST2Q9H3Q3 398 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
TFE3-201ENST00000315869 TBR1Q16650 682 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 CLEC7AQ9BXN2 247 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 ZNF430Q9H8G1 570 aaPredicted RBP12.07□□□□□ -0.48
TFE3-201ENST00000315869 ZNF257Q9Y2Q1 563 aa12.07□□□□□ -0.48
TFE3-201ENST00000315869 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
TFE3-201ENST00000315869 KLHDC1Q8N7A1 406 aa12.06□□□□□ -0.48
TFE3-201ENST00000315869 NUP35Q8NFH5 326 aa12.06□□□□□ -0.48
TFE3-201ENST00000315869 C18orf32Q8TCD1 76 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms