RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 CTRB2Q6GPI1 263 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 TMEM219Q86XT9 240 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 NPIPB3Q92617 1050 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 MTORP42345 2549 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 TCRBV4S1A1TA0A5B7 111 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 APELAP0DMC3 54 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 RND2P52198 227 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 IQCF2Q8IXL9 164 aa19.69■□□□□ 0.74
CDPF1-201ENST00000314567 TMEM116Q8NCL8 245 aa19.68■□□□□ 0.74
CDPF1-201ENST00000314567 ARPC1AQ92747 370 aa19.68■□□□□ 0.74
CDPF1-201ENST00000314567 ZNF48Q96MX3 618 aaPredicted RBP19.68■□□□□ 0.74
CDPF1-201ENST00000314567 RNF2Q99496 336 aa19.68■□□□□ 0.74
CDPF1-201ENST00000314567 H3BUX3 64 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 LY6EQ16553 131 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.67■□□□□ 0.74
CDPF1-201ENST00000314567 TMUB1Q9BVT8 246 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 FUT9Q9Y231 359 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 CD99P14209 185 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 SLC25A33Q9BSK2 321 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 WNT10AQ9GZT5 417 aa19.67■□□□□ 0.74
CDPF1-201ENST00000314567 SEPSECSQ9HD40 501 aaKnown RBP19.67■□□□□ 0.74
CDPF1-201ENST00000314567 IGKV1D-37A0A075B6S9 117 aa19.66■□□□□ 0.74
CDPF1-201ENST00000314567 OR5G3P0C626 314 aa19.66■□□□□ 0.74
CDPF1-201ENST00000314567 ARL14EPLP0DKL9 152 aa19.66■□□□□ 0.74
CDPF1-201ENST00000314567 CX3CL1P78423 397 aa19.66■□□□□ 0.74
CDPF1-201ENST00000314567 Q8N9W7 124 aa19.66■□□□□ 0.74
CDPF1-201ENST00000314567 GSX1Q9H4S2 264 aaPredicted RBP19.66■□□□□ 0.74
CDPF1-201ENST00000314567 FAM74A7A6NL05 159 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 NPIPB5A8MRT5 1133 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 TMEM250H0YL14 139 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 HLA-DRB1P01911 266 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 CEBPGP53567 150 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 CD81P60033 236 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 RHEBQ15382 184 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 FAM74A3Q4VXF1 159 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 AWAT1Q58HT5 328 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 FAM78BQ5VT40 261 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 FAM90A2PQ658T7 463 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 GATAD1Q8WUU5 269 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 TRGV9Q99603 122 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 TXNDC17Q9BRA2 123 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 MRPL32Q9BYC8 188 aaKnown RBP19.65■□□□□ 0.74
CDPF1-201ENST00000314567 TNFRSF19Q9NS68 423 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 MRPL36Q9P0J6 103 aaKnown RBP19.65■□□□□ 0.74
CDPF1-201ENST00000314567 DMRT1Q9Y5R6 373 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 SRP14P37108 136 aaKnown RBP19.65■□□□□ 0.74
CDPF1-201ENST00000314567 BPIFB3P59826 476 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 C19orf35Q6ZS72 473 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 PFDN5Q99471 154 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 NIPSNAP3BQ9BS92 247 aa19.65■□□□□ 0.74
CDPF1-201ENST00000314567 HIVEP2P31629 2446 aa19.64■□□□□ 0.73
CDPF1-201ENST00000314567 M0R036 132 aa19.64■□□□□ 0.73
CDPF1-201ENST00000314567 IGHV4-59P01825 116 aa19.64■□□□□ 0.73
CDPF1-201ENST00000314567 GATA2P23769 480 aaPredicted RBP19.64■□□□□ 0.73
CDPF1-201ENST00000314567 C9orf139Q6ZV77 190 aa19.64■□□□□ 0.73
CDPF1-201ENST00000314567 OR1L4Q8NGR5 311 aa19.64■□□□□ 0.73
CDPF1-201ENST00000314567 SH2D7A6NKC9 451 aaPredicted RBP19.63■□□□□ 0.73
CDPF1-201ENST00000314567 I3L2K1 104 aa19.63■□□□□ 0.73
CDPF1-201ENST00000314567 PAGE4O60829 102 aa19.63■□□□□ 0.73
CDPF1-201ENST00000314567 TAS2R45P59539 299 aa19.63■□□□□ 0.73
CDPF1-201ENST00000314567 SPATA31B1PQ5VZV4 182 aa19.63■□□□□ 0.73
CDPF1-201ENST00000314567 TECRQ9NZ01 308 aaKnown RBP19.63■□□□□ 0.73
CDPF1-201ENST00000314567 PUS1Q9Y606 427 aaKnown RBP eCLIP19.63■□□□□ 0.73
CDPF1-201ENST00000314567 PSMB11A5LHX3 300 aa19.62■□□□□ 0.73
CDPF1-201ENST00000314567 H3BQ15 152 aa19.62■□□□□ 0.73
CDPF1-201ENST00000314567 IGHV3-48P01763 117 aa19.62■□□□□ 0.73
CDPF1-201ENST00000314567 RASL11BQ9BPW5 248 aa19.62■□□□□ 0.73
CDPF1-201ENST00000314567 FAM103A1Q9BTL3 118 aaKnown RBP19.62■□□□□ 0.73
CDPF1-201ENST00000314567 GCHFRP30047 84 aa19.62■□□□□ 0.73
CDPF1-201ENST00000314567 MIR17HGQ75NE6 70 aa19.61■□□□□ 0.73
CDPF1-201ENST00000314567 TTC9CQ8N5M4 171 aa19.61■□□□□ 0.73
CDPF1-201ENST00000314567 TVP23CQ96ET8 276 aa19.61■□□□□ 0.73
CDPF1-201ENST00000314567 ARL2-SNX15V9GYD0 113 aa19.61■□□□□ 0.73
CDPF1-201ENST00000314567 IGHV7-81A0A0B4J1V7 117 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 C7orf77A4D0Y5 90 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 NDPQ00604 133 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 ZNF90Q03938 601 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 PQLC2Q6ZP29 291 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 OR4F5Q8NH21 305 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 OR4X1Q8NH49 305 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 OR4F4Q96R69 305 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 DNAJC4Q9NNZ3 241 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 TMA7Q9Y2S6 64 aaKnown RBP19.6■□□□□ 0.73
CDPF1-201ENST00000314567 F8P00451 2351 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 C11orf94C9JXX5 98 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 NUPL2O15504 423 aaKnown RBP19.6■□□□□ 0.73
CDPF1-201ENST00000314567 PDE6DO43924 150 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 COX7A2P2O60397 106 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 CLN5O75503 358 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 PNRC1Q12796 327 aaPredicted RBP19.6■□□□□ 0.73
CDPF1-201ENST00000314567 ASPHD1Q5U4P2 390 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 TMEM88Q6PEY1 159 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 TMEM37Q8WXS4 190 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 RPS10P5Q9NQ39 176 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 TMEM167BQ9NRX6 74 aa19.6■□□□□ 0.73
CDPF1-201ENST00000314567 IER3P46695 156 aa19.59■□□□□ 0.73
CDPF1-201ENST00000314567 CBLN2Q8IUK8 224 aa19.59■□□□□ 0.73
CDPF1-201ENST00000314567 SIGLECL1Q8N7X8 197 aa19.59■□□□□ 0.73
CDPF1-201ENST00000314567 DUX5Q96PT3 197 aa19.59■□□□□ 0.73
CDPF1-201ENST00000314567 C8orf88P0DMB2 117 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms