RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CST7O76096 145 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 YIF1AO95070 293 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 SLC25A4P12235 298 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 CAV2P51636 162 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 ATP5IP56385 69 aaPredicted RBP6.9□□□□□ -1.3
PDE4D-201ENST00000309641 VAMP2P63027 116 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 ZNF90Q03938 601 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 FAM106AQ4KMX7 169 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 Q5BKY6 102 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 TMEM190Q8WZ59 177 aa6.9□□□□□ -1.3
PDE4D-201ENST00000309641 PUS1Q9Y606 427 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDE4D-201ENST00000309641 SORL1Q92673 2214 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 IGHV3-49A0A0A0MS15 119 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 IGSF23A1L1A6 192 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 IZUMO1RA6ND01 250 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 LGALS9O00182 355 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 MPC2O95563 127 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 FOLR2P14207 255 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 OR10J1P30954 320 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 GPX4P36969 197 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-201ENST00000309641 BCAP31P51572 246 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 RPP30P78346 268 aaKnown RBP6.89□□□□□ -1.31
PDE4D-201ENST00000309641 C9orf66Q5T8R8 295 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 TOMM20LQ6UXN7 152 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 TMEM217Q8N7C4 229 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 MCRIP2Q9BUT9 160 aaKnown RBP6.89□□□□□ -1.31
PDE4D-201ENST00000309641 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 A8MWP6 167 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 NDUFA4O00483 81 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 WIPF1O43516 503 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 CBLN1P23435 193 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 CYCSP99999 105 aaKnown RBP6.89□□□□□ -1.31
PDE4D-201ENST00000309641 ETFRF1Q6IPR1 90 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 TMEM252Q8N6L7 170 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 CHAC2Q8WUX2 184 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 SLC35E1Q96K37 410 aa6.89□□□□□ -1.31
PDE4D-201ENST00000309641 LYRM2Q9NU23 88 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-201ENST00000309641 GAR1Q9NY12 217 aaKnown RBP6.89□□□□□ -1.31
PDE4D-201ENST00000309641 TRAV14DV4A0A0A6YYC5 116 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 LY86O95711 162 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 IGLV1-51P01701 117 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 APOHP02749 345 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 NHLH2Q02577 135 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 RELQ04864 619 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 ZNF600Q6ZNG1 722 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 TMEM182Q6ZP80 229 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 OR10P1Q8NGE3 313 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 ELOVL1Q9BW60 279 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 MLXQ9UH92 298 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 SMCO3A2RU48 225 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 ZFP92A6NM28 416 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 PSG1P11464 419 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 PVALBP20472 110 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 GATA2P23769 480 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 OR2F1Q13607 317 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 LILRB2Q8N423 598 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 OR1S2Q8NGQ3 325 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 DAZ1Q9NQZ3 744 aaKnown RBP6.88□□□□□ -1.31
PDE4D-201ENST00000309641 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
PDE4D-201ENST00000309641 IGHV3-66A0A0C4DH42 116 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
PDE4D-201ENST00000309641 INSL3P51460 131 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 DEFA6Q01524 100 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 AKR1C1Q04828 323 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
PDE4D-201ENST00000309641 BTNL8Q6UX41 500 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 THAP8Q8NA92 274 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
PDE4D-201ENST00000309641 TRAV30A0A087WSZ9 112 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 WI2-2373I1.2A0A1W2PRP0 233 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 E5RGE8 158 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 G3V3Q6 166 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 RLN2P04090 185 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 RD3LP0DJH9 198 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 C8orf88P0DMB2 117 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 SULT1A1P50225 295 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 YPEL3P61236 119 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-201ENST00000309641 DLK1P80370 383 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 EWSR1Q01844 656 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDE4D-201ENST00000309641 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 USF2Q15853 346 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-201ENST00000309641 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 PRR25Q96S07 402 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 UFC1Q9Y3C8 167 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 SMLR1H3BR10 107 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 K7EMT4 169 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 TOMM40O96008 361 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 IL4P05112 153 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 GIPP09681 153 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-201ENST00000309641 P2RY1P47900 373 aa6.86□□□□□ -1.31
PDE4D-201ENST00000309641 ELLP55199 621 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-201ENST00000309641 Q6ZNX1 250 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms