RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TPTE2P1Q5T6R2 138 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 OR4A47Q6IF82 309 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 H1FOOQ8IZA3 346 aaPredicted RBP6.55□□□□□ -1.36
CHD6-201ENST00000309279 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 STPG3Q8N7X2 389 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 MARVELD1Q9BSK0 173 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
CHD6-201ENST00000309279 FAM30AQ9NZY2 134 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 MTFP1Q9UDX5 166 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 HILPDAQ9Y5L2 63 aa6.55□□□□□ -1.36
CHD6-201ENST00000309279 FAM231BA6NCW3 169 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 CCL25O15444 150 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 HOXA3O43365 443 aaPredicted RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 IGHV4-59P01825 116 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 TBPP20226 339 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 IL3RAP26951 378 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 SSBP1Q04837 148 aaKnown RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 DIAPH2-AS1Q14236 149 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 LINC00299Q6ZSB3 139 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 UBAC2Q8NBM4 344 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 OR5R1Q8NH85 324 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 SMIM4Q8WVI0 70 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 RTN4IP1Q8WWV3 396 aaPredicted RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 GINS4Q9BRT9 223 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 MS4A6AQ9H2W1 248 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 OR51J1Q9H342 316 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 KLK11Q9UBX7 282 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 V9GYH0 126 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 SAA2-SAA4A0A096LPE2 208 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 A0A1W2PPI3 338 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 CORTO00230 105 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 HSD17B6O14756 317 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 GSTZ1O43708 216 aaPredicted RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 PROP1O75360 226 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 TOMM40O96008 361 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 SAA2P0DJI9 122 aaPredicted RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 OR5H8P0DN80 308 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 FOLR2P14207 255 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 TAS2R46P59540 309 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 CD164Q04900 197 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 FCN2Q15485 313 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 ZFP69Q49AA0 526 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 ZNF660Q6AZW8 331 aaPredicted RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 DHRS11Q6UWP2 260 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 ZNF833PQ6ZTB9 187 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 PRR26Q8N8Z3 221 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 OR10G4Q8NGN3 311 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 RBPMSQ93062 196 aaKnown RBP6.54□□□□□ -1.36
CHD6-201ENST00000309279 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 HSPB8Q9UJY1 196 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 OR2W1Q9Y3N9 320 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 RFNGQ9Y644 331 aa6.54□□□□□ -1.36
CHD6-201ENST00000309279 COL6A5A8TX70 2615 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 IGHV1-3A0A0C4DH29 117 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 H3BUX3 64 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 CCL24O00175 119 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 TAAR5O14804 337 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 NFYAP23511 347 aaPredicted RBP6.53□□□□□ -1.36
CHD6-201ENST00000309279 BRS3P32247 399 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 HRH1P35367 487 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 RFX2P48378 723 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 UBA52P62987 128 aaKnown RBP6.53□□□□□ -1.36
CHD6-201ENST00000309279 DGCR2P98153 550 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 PPP1R1AQ13522 171 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 EBI3Q14213 229 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 ZNF79Q15937 498 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 GUCA2BQ16661 112 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 VAX1Q5SQQ9 334 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 FAM162BQ5T6X4 162 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 LAMTOR1Q6IAA8 161 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.53□□□□□ -1.36
CHD6-201ENST00000309279 ABHD14BQ96IU4 210 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 U3KQ87 197 aa6.53□□□□□ -1.36
CHD6-201ENST00000309279 ZNF736B4DX44 427 aaPredicted RBP6.52□□□□□ -1.37
CHD6-201ENST00000309279 TIMM23O14925 209 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 CDS2O95674 445 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 IGLV2-14P01704 120 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 PMP2P02689 132 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 TRAPPC2P0DI81 140 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 TRAPPC2BP0DI82 140 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 FCGR2CP31995 323 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 REG1BP48304 166 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 RAB5BP61020 215 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 RPL39P5Q59GN2 51 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 LIAT1Q6ZQX7 453 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 C16orf82Q7Z2V1 217 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 DRAM1Q8N682 238 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 GATD1Q8NB37 220 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 TMEM229BQ8NBD8 167 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 OR1S2Q8NGQ3 325 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 OR5H2Q8NGV7 314 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 HIST1H2BAQ96A08 127 aa6.52□□□□□ -1.37
CHD6-201ENST00000309279 MED9Q9NWA0 146 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms