RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 LINC00527Q9UJ94 153 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 PXMP4Q9Y6I8 212 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 WNK1Q9H4A3 2382 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 M0QZK8 103 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 HOXA3O43365 443 aaPredicted RBP5.45□□□□□ -1.54
PTCD2-201ENST00000308077 SOX15O60248 233 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 IGHG2P01859 326 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 ADCYAP1P18509 176 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 RPL29P47914 159 aaKnown RBP5.45□□□□□ -1.54
PTCD2-201ENST00000308077 B2MP61769 119 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 LINC01559Q495D7 138 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 ETFRF1Q6IPR1 90 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 DPPA3Q6W0C5 159 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 TMEM116Q8NCL8 245 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 OR10G4Q8NGN3 311 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 OR10G9Q8NGN4 311 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 OR10G7Q8NGN6 311 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 OR5R1Q8NH85 324 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 SMR3AQ99954 134 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 YAE1D1Q9NRH1 226 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 NDUFB8O95169 186 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 TSPAN15O95858 294 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 H2AFB1P0C5Y9 115 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 M6PRP20645 277 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 ZNF90Q03938 601 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 KLK9Q2XQG4 91 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 AKIRIN2Q53H80 203 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 CYP2G1PQ6ZSU1 146 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 SIGLECL1Q8N7X8 197 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 OR1L6Q8NGR2 347 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 SLC25A22Q9H936 323 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 SLC39A9Q9NUM3 307 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 VPREB3Q9UKI3 123 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 KLK9Q9UKQ9 250 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 S4R3C0 116 aa5.45□□□□□ -1.54
PTCD2-201ENST00000308077 TENM1Q9UKZ4 2725 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 TRAV41A0A0B4J266 112 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 TCRBV4S1A1TA0A5B7 111 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
PTCD2-201ENST00000308077 OR2J3O76001 311 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 MBP02144 154 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 IGF1P05019 195 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 ZP3P21754 424 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 RAB31Q13636 194 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 ACOT6Q3I5F7 207 aaPredicted RBP5.44□□□□□ -1.54
PTCD2-201ENST00000308077 FAM122CQ6P4D5 195 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 ATRAIDQ6UW56 229 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 LCN15Q6UWW0 184 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 IL34Q6ZMJ4 242 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 SLC35E3Q7Z769 313 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 OR4X1Q8NH49 305 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 SFT2D1Q8WV19 159 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 MBD3L1Q8WWY6 194 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 TMEM68Q96MH6 324 aa5.44□□□□□ -1.54
PTCD2-201ENST00000308077 NOL4LQ96MY1 436 aaPredicted RBP5.44□□□□□ -1.54
PTCD2-201ENST00000308077 VWFP04275 2813 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TRBV9A0A0B4J1U6 114 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 RAB19A4D1S5 217 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 PSMB11A5LHX3 300 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 BTBD17A6NE02 478 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 ZFP92A6NM28 416 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 SEC14L6B5MCN3 397 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 HMGB3O15347 200 aaKnown RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 IGLC1P0CG04 106 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 SRP14P37108 136 aaKnown RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 FGF8P55075 233 aaPredicted RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TMEM95Q3KNT9 176 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 SPATA31B1PQ5VZV4 182 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 DUX5Q96PT3 197 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TRGV9Q99603 122 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 KCNIP2Q9NS61 270 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 RYR1P21817 5038 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 CUBNO60494 3623 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TRAV1-1A0A0B4J248 108 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 CTXND1A0A1B0GTU2 59 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 MAP1LC3B2A6NCE7 125 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 CLN5O75503 358 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 IGKV1-17P01599 117 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 IGHV3-23P01764 117 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 PPIFP30405 207 aaKnown RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 CDC34P49427 236 aaPredicted RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TIGITQ495A1 244 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TEX29Q8N6K0 151 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 RAB24Q969Q5 203 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 ACTR3CQ9C0K3 210 aaPredicted RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 MAP1LC3BQ9GZQ8 125 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 GAR1Q9NY12 217 aaKnown RBP5.43□□□□□ -1.54
PTCD2-201ENST00000308077 FBXL7Q9UJT9 491 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 MXRA5Q9NR99 2828 aa5.43□□□□□ -1.54
PTCD2-201ENST00000308077 TMEM218A2RU14 115 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 NUDT19A8MXV4 375 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 LY6G6DO95868 133 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 CD5P06127 495 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 HIST1H1BP16401 226 aaKnown RBP5.42□□□□□ -1.54
PTCD2-201ENST00000308077 RHOGP84095 191 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 CFHR3Q02985 330 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 PATE2Q6UY27 113 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 TMEM37Q8WXS4 190 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 MS4A10Q96PG2 267 aa5.42□□□□□ -1.54
PTCD2-201ENST00000308077 RARRES2Q99969 163 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms