RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 MED12LQ86YW9 2145 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 M0R296 226 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 PRRG2O14669 202 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 TM4SF20Q53R12 229 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 PNKDQ8N490 385 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 GUCD1Q96NT3 240 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 LY6G6EA0A0G2JKS1 128 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 ZNF138P52744 262 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 GP6Q9HCN6 339 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 EPDR1Q9UM22 224 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 U3KQA8 63 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 C9orf172C9J069 976 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 GNG7O60262 68 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 TDGF1P13385 188 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 SLAQ13239 276 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
SEC23A-201ENST00000307712 VDAC2P45880 294 aaPredicted RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 RBPMS2Q6ZRY4 209 aaKnown RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 OSR1Q8TAX0 266 aaPredicted RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 NAA38Q9BRA0 125 aaKnown RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 ZNF785A8K8V0 405 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 CCL3L1P16619 93 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 GPR183P32249 361 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 CKS2P33552 79 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 PRR7Q8TB68 274 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 PPIAL4EA0A075B759 164 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 PPIAL4FP0DN26 164 aa11.06□□□□□ -0.64
SEC23A-201ENST00000307712 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
SEC23A-201ENST00000307712 TRGV8A0A0C4DH27 118 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 IGHV1-69-2A0A0G2JMI3 117 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 A0A1B0GUT8 65 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 NCBP2LA6PVI3 153 aaKnown RBP11.05□□□□□ -0.64
SEC23A-201ENST00000307712 WFDC3Q8IUB2 231 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 C9orf106Q8NAJ2 232 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 CREBBPQ92793 2442 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 A0A087X0K7 114 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 SRRM5B3KS81 715 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 GGTLC3B5MD39 225 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 IGLV2-14P01704 120 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 CDX2Q99626 313 aaPredicted RBP11.05□□□□□ -0.64
SEC23A-201ENST00000307712 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
SEC23A-201ENST00000307712 FABP2P12104 132 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 PET117Q6UWS5 81 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 ST20Q9HBF5 79 aa11.05□□□□□ -0.64
SEC23A-201ENST00000307712 MRPL27Q9P0M9 148 aaKnown RBP11.05□□□□□ -0.64
SEC23A-201ENST00000307712 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 IGLL1P15814 213 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 CD24P25063 80 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 THYN1Q9P016 225 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 IGKV1D-17A0A075B6S4 117 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 H3BUT2 72 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 PSG1P11464 419 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 KRTAP27-1Q3LI81 207 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 Q9H3A6 140 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
SEC23A-201ENST00000307712 PMS2P5A8MQ11 134 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 GLRXP35754 106 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 TWIST1Q15672 202 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 TMEM116Q8NCL8 245 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
SEC23A-201ENST00000307712 A1L4Q6 167 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 IGKV1-16P04430 117 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 UFC1Q9Y3C8 167 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 TMEM131Q92545 1883 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 C7orf71A4D174 169 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
SEC23A-201ENST00000307712 MC5RP33032 325 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 ZCCHC24Q8N2G6 241 aaKnown RBP11.03□□□□□ -0.64
SEC23A-201ENST00000307712 ZNRD1Q9P1U0 126 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 LTBP2Q14767 1821 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 MUC22E2RYF6 1773 aaPredicted RBP11.03□□□□□ -0.64
SEC23A-201ENST00000307712 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 WNT2P09544 360 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 PRB3Q04118 309 aaPredicted RBP11.03□□□□□ -0.64
SEC23A-201ENST00000307712 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
SEC23A-201ENST00000307712 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.64
SEC23A-201ENST00000307712 ZNF207O43670 478 aaKnown RBP11.02□□□□□ -0.64
SEC23A-201ENST00000307712 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 CLEC3BP05452 202 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 C11orf52Q96A22 123 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 S4R3C0 116 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 LAMA3Q16787 3333 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 AHRRA9YTQ3 701 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 RPL11P62913 178 aaKnown RBP11.02□□□□□ -0.65
SEC23A-201ENST00000307712 VWC2Q2TAL6 325 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 C2orf83Q53S99 150 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 FAM168AQ92567 244 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms