RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PSMG3Q9BT73 122 aaPredicted RBP10.52□□□□□ -0.73
USP38-201ENST00000307017 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 SCN4AP35499 1836 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 DPM2O94777 84 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 CITED1Q99966 193 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 GREB1LQ9C091 1923 aaPredicted RBP10.51□□□□□ -0.73
USP38-201ENST00000307017 NEUROG1Q92886 237 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 PKIBQ9C010 78 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 MARF1Q9Y4F3 1742 aaKnown RBP10.51□□□□□ -0.73
USP38-201ENST00000307017 ALPK2Q86TB3 2170 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 ARID2Q68CP9 1835 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 AHRRA9YTQ3 701 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 H3BRM9 83 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 S100A7L2Q5SY68 101 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 KMT2EQ8IZD2 1858 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 TMEM8BA6NDV4 472 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 GFRA3O60609 400 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 PSG3Q16557 428 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 ZNF562Q6V9R5 426 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 C9orf106Q8NAJ2 232 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 ADARB2-AS1A8MUL3 147 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 INS-IGF2F8WCM5 200 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 INSP01308 110 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 FOXG1P55316 489 aaPredicted RBP10.51□□□□□ -0.73
USP38-201ENST00000307017 GUSBP1Q15486 140 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 SAP25Q8TEE9 199 aa10.51□□□□□ -0.73
USP38-201ENST00000307017 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
USP38-201ENST00000307017 IGHV2OR16-5A0A0B4J2B6 119 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 ORAOV1Q8WV07 137 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 CHCHD2Q9Y6H1 151 aaPredicted RBP10.5□□□□□ -0.73
USP38-201ENST00000307017 SIPA1L3O60292 1781 aaPredicted RBP10.5□□□□□ -0.73
USP38-201ENST00000307017 SLC25A20O43772 301 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 VENTXO95231 258 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 ABCA7Q8IZY2 2146 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
USP38-201ENST00000307017 IGHV3-16A0A0C4DH30 117 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 M0R2P5 195 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 EFEMP2O95967 443 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 PPP1R32Q7Z5V6 425 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 RNF182Q8N6D2 247 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 WNK3Q9BYP7 1800 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 AMBPP02760 352 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 ZNF479Q96JC4 524 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 GFI1Q99684 422 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 IFI27P40305 119 aaPredicted RBP10.5□□□□□ -0.73
USP38-201ENST00000307017 EFNB3Q15768 340 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
USP38-201ENST00000307017 FOXD3Q9UJU5 478 aaPredicted RBP10.5□□□□□ -0.73
USP38-201ENST00000307017 LINC00479Q96M42 142 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 LILRA1O75019 489 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 FREM3P0C091 2139 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 RBBP6Q7Z6E9 1792 aaKnown RBP10.49□□□□□ -0.73
USP38-201ENST00000307017 STPG4Q8N801 248 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 KLHDC3Q9BQ90 382 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 A0A1W2PRE2 83 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 RHOGP84095 191 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 GAGE2AQ6NT46 116 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 OR9G4Q8NGQ1 327 aa10.49□□□□□ -0.73
USP38-201ENST00000307017 VDAC2P45880 294 aaPredicted RBP10.49□□□□□ -0.73
USP38-201ENST00000307017 TRAV40A0A0B4J280 105 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 CA7P43166 264 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 IGFBPL1Q8WX77 278 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 KBTBD11-OT1A0A1B0GTJ5 212 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 APOBEC3AP31941 199 aaPredicted RBP10.48□□□□□ -0.73
USP38-201ENST00000307017 DNM1P46Q6ZS02 220 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 COPS9Q8WXC6 57 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 RP1L1Q8IWN7 2480 aaPredicted RBP10.48□□□□□ -0.73
USP38-201ENST00000307017 NDUFS8O00217 210 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 PAX4O43316 350 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 SP9P0CG40 484 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
USP38-201ENST00000307017 ABHD17AQ96GS6 310 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 PSG8Q9UQ74 426 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 SRCAPQ6ZRS2 3230 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 FAM90A26D6RGX4 464 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 ZNF329Q86UD4 541 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 FAM168AQ92567 244 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 IGHMP01871 453 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 GREM1O60565 184 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 FOXF2Q12947 444 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 SPXQ9BT56 116 aa10.48□□□□□ -0.73
USP38-201ENST00000307017 AHDC1Q5TGY3 1603 aaPredicted RBP10.48□□□□□ -0.73
USP38-201ENST00000307017 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 ACTL10Q5JWF8 245 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 HIST3H2BBQ8N257 126 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms