RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 DCHS2Q6V1P9 2916 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 DLL1O00548 723 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 PPOXP50336 477 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 FAM168AQ92567 244 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 SSBP3Q9BWW4 388 aaPredicted RBP12.22□□□□□ -0.45
CSDC2-201ENST00000306149 MRPL32Q9BYC8 188 aaKnown RBP12.22□□□□□ -0.45
CSDC2-201ENST00000306149 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
CSDC2-201ENST00000306149 DNAJC4Q9NNZ3 241 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 SLC25A17O43808 307 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 GPX1P07203 203 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 VN1R17PQ8TDU5 208 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 FAM103A1Q9BTL3 118 aaKnown RBP12.22□□□□□ -0.45
CSDC2-201ENST00000306149 CTSZQ9UBR2 303 aa12.22□□□□□ -0.45
CSDC2-201ENST00000306149 TMEM178BH3BS89 294 aa12.21□□□□□ -0.45
CSDC2-201ENST00000306149 AMY1AP04745 511 aa12.21□□□□□ -0.45
CSDC2-201ENST00000306149 KCNS1Q96KK3 526 aa12.21□□□□□ -0.45
CSDC2-201ENST00000306149 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.45
CSDC2-201ENST00000306149 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.45
CSDC2-201ENST00000306149 FBXL7Q9UJT9 491 aa12.21□□□□□ -0.45
CSDC2-201ENST00000306149 IGHV3-21A0A0B4J1V1 117 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 PSMB11A5LHX3 300 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 ENSAO43768 121 aaKnown RBP12.21□□□□□ -0.46
CSDC2-201ENST00000306149 TMEM177Q53S58 311 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.46
CSDC2-201ENST00000306149 PATE2Q6UY27 113 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 OR4C13Q8NGP0 309 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 SGK494Q96LW2 274 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 PAM16Q9Y3D7 125 aa12.21□□□□□ -0.46
CSDC2-201ENST00000306149 COX7A2P2O60397 106 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 HLA-DQA1P01909 254 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 RPLP1P05386 114 aaKnown RBP12.2□□□□□ -0.46
CSDC2-201ENST00000306149 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
CSDC2-201ENST00000306149 HCP5Q6MZN7 132 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 ABHD17AQ96GS6 310 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 RNF2Q99496 336 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 RNF114Q9Y508 228 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 PRRG2O14669 202 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 NDUFB3O43676 98 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 USF1P22415 310 aaPredicted RBP12.2□□□□□ -0.46
CSDC2-201ENST00000306149 Q8N976 141 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
CSDC2-201ENST00000306149 PRR31Q5SQ13 230 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 CBY1Q9Y3M2 126 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 TBL2Q9Y4P3 447 aaKnown RBP12.19□□□□□ -0.46
CSDC2-201ENST00000306149 MOSP00540 346 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 IGLV2-23P01705 113 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 TMEM167AQ8TBQ9 72 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 CACNG8Q8WXS5 425 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
CSDC2-201ENST00000306149 IGKV1D-37A0A075B6S9 117 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 C10orf113Q5VZT2 155 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 RCHY1Q96PM5 261 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 A0A1W2PPI3 338 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 BMPR1BO00238 502 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 GNG5P63218 68 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 PRR27Q6MZM9 219 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 NRN1Q9NPD7 142 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
CSDC2-201ENST00000306149 A0A1W2PS18 150 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 IZUMO1RA6ND01 250 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 ORM2P19652 201 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
CSDC2-201ENST00000306149 AMTP48728 403 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 KRTDAPP60985 99 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 PRR30Q53SZ7 412 aaPredicted RBP12.18□□□□□ -0.46
CSDC2-201ENST00000306149 ST6GALNAC6Q969X2 333 aa12.18□□□□□ -0.46
CSDC2-201ENST00000306149 DIRC3C9JPN6 131 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 CNTFRP26992 372 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 SRIP30626 198 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 WASHC3Q9Y3C0 194 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 A0A1W2PN81 502 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 LYNX1G3V0Z9 82 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 H3BTX0 84 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 ZNF324O75467 553 aaPredicted RBP12.17□□□□□ -0.46
CSDC2-201ENST00000306149 LYNX1P0DP58 116 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
CSDC2-201ENST00000306149 RASL11AQ6T310 242 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 LINC00305Q7Z4B0 112 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 WIPF2Q8TF74 440 aaPredicted RBP12.17□□□□□ -0.46
CSDC2-201ENST00000306149 RNASE6Q93091 150 aaKnown RBP12.17□□□□□ -0.46
CSDC2-201ENST00000306149 DYNLRB1Q9NP97 96 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
CSDC2-201ENST00000306149 ZNF253O75346 499 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 CTRLP40313 264 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 PDPNQ86YL7 162 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 TMEM186Q96B77 213 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 FAM231DQ6ZW35 169 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 VSTM2AQ8TAG5 236 aa12.16□□□□□ -0.46
CSDC2-201ENST00000306149 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
CSDC2-201ENST00000306149 SVEP1Q4LDE5 3571 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 C22orf46C9J442 243 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms