RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CFAP161Q6P656 301 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 Q8N6K4 173 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 UHRF2Q96PU4 802 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 C19orf24Q9BVV8 132 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 SLC25A2Q9BXI2 301 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 GSX1Q9H4S2 264 aaPredicted RBP5.2□□□□□ -1.58
USP47-201ENST00000305481 TECRQ9NZ01 308 aaKnown RBP5.2□□□□□ -1.58
USP47-201ENST00000305481 DOK5Q9P104 306 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 UBR5O95071 2799 aaPredicted RBP5.19□□□□□ -1.58
USP47-201ENST00000305481 I3L2K1 104 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 MT-CO2P00403 227 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 OR10J4P0C629 311 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 TXNDC17Q9BRA2 123 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 FAM103A1Q9BTL3 118 aaKnown RBP5.19□□□□□ -1.58
USP47-201ENST00000305481 AURKAIP1Q9NWT8 199 aaPredicted RBP5.19□□□□□ -1.58
USP47-201ENST00000305481 FBN2P35556 2912 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 EPG5Q9HCE0 2579 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 F6UZH7 168 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 CLDN34H7C241 214 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 CNIH1O95406 144 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 EBI3Q14213 229 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 HES1Q14469 280 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 C5orf64Q2M2E5 130 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 MINOS1Q5TGZ0 78 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 LINC01551Q86U37 167 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 MRPL41Q8IXM3 137 aaKnown RBP5.19□□□□□ -1.58
USP47-201ENST00000305481 OR4X1Q8NH49 305 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 TNFRSF19Q9NS68 423 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 MINOS1-NBL1R4GNA1 71 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 C1orf196B1AJZ1 125 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 OR7C2O60412 319 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 C8orf88P0DMB2 117 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 FXYD3Q14802 87 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 FAM120AOSQ5T036 256 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 ASPHD1Q5U4P2 390 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 ETFRF1Q6IPR1 90 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 PQLC2Q6ZP29 291 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 C16orf82Q7Z2V1 217 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 OR2T10Q8NGZ9 312 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 SRSF8Q9BRL6 282 aaKnown RBP5.19□□□□□ -1.58
USP47-201ENST00000305481 CTDSP1Q9GZU7 261 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 LPAR2Q9HBW0 351 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 CBY1Q9Y3M2 126 aa5.19□□□□□ -1.58
USP47-201ENST00000305481 OOSP1A8MZH6 123 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 GGTLC3B5MD39 225 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 PFN1P07737 140 aaKnown RBP5.18□□□□□ -1.58
USP47-201ENST00000305481 UBE2E1P51965 193 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 SELENOTP62341 195 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 NDPQ00604 133 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 C1QL4Q86Z23 238 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 PIP4P2Q8N4L2 257 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 C11orf52Q96A22 123 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 TRGV9Q99603 122 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 CCL19Q99731 98 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 MRPL32Q9BYC8 188 aaKnown RBP5.18□□□□□ -1.58
USP47-201ENST00000305481 TMEM167BQ9NRX6 74 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 ZNF355PQ9NSJ1 428 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 IGHV4-61A0A0C4DH41 118 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 K7EIM0 57 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 CORTO00230 105 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 COX7A2P2O60397 106 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 RPS10P46783 165 aaKnown RBP5.18□□□□□ -1.58
USP47-201ENST00000305481 PDLIM4P50479 330 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 RAB5BP61020 215 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 CX3CL1P78423 397 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 COTL1Q14019 142 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 KLF17Q5JT82 389 aaPredicted RBP5.18□□□□□ -1.58
USP47-201ENST00000305481 C10orf113Q5VZT2 155 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 CCDC144NLQ6NUI1 221 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 OR5T1Q8NG75 326 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 ELOVL1Q9BW60 279 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 NIT2Q9NQR4 276 aa5.18□□□□□ -1.58
USP47-201ENST00000305481 POLR3KQ9Y2Y1 108 aaPredicted RBP5.18□□□□□ -1.58
USP47-201ENST00000305481 NCBP2LA6PVI3 153 aaKnown RBP5.17□□□□□ -1.58
USP47-201ENST00000305481 IGLC1P0CG04 106 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 PYYP10082 97 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 EGR2P11161 476 aaPredicted RBP5.17□□□□□ -1.58
USP47-201ENST00000305481 SAA4P35542 130 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 TAS2R45P59539 299 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 SRSF1Q07955 248 aaKnown RBP eCLIP5.17□□□□□ -1.58
USP47-201ENST00000305481 OR5AU1Q8NGC0 362 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 OCC1Q8TAD7 63 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 ARL2-SNX15V9GYD0 113 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 LRRK2Q5S007 2527 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 TRBV24-1A0A075B6N3 115 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 VWC2LB2RUY7 222 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 GOSR1O95249 250 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 ORM2P19652 201 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 SNRPEP62304 92 aaKnown RBP5.17□□□□□ -1.58
USP47-201ENST00000305481 ZNF562Q6V9R5 426 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 LINC00305Q7Z4B0 112 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 ZNF843Q8N446 348 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 NECAP1Q8NC96 275 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 C10orf105Q8TEF2 133 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 NRGNQ92686 78 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 PFDN5Q99471 154 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 RNF2Q99496 336 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 BIN3Q9NQY0 253 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 TBL2Q9Y4P3 447 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms