RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 SMPXQ9UHP9 88 aa12.74□□□□□ -0.37
NDUFA3-201ENST00000303553 TSPAN4O14817 238 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 ZNF207O43670 478 aaKnown RBP12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 IGLC1P0CG04 106 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 YPEL3P61236 119 aaPredicted RBP12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 MLANAQ16655 118 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 IAH1Q2TAA2 248 aaPredicted RBP12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 C11orf87Q6NUJ2 197 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 OR4D5Q8NGN0 318 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 Q8WTZ3 238 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 ACY3Q96HD9 319 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 NARS2Q96I59 477 aaKnown RBP12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 MAGT1Q9H0U3 335 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 PAIP2BQ9ULR5 123 aaKnown RBP12.73□□□□□ -0.37
NDUFA3-201ENST00000303553 A0A1W2PS18 150 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 MPTX1A8MV57 137 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 FABP1P07148 127 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 ID3Q02535 119 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 TIGITQ495A1 244 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 NPIPB3Q92617 1050 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 ZNF414Q96IQ9 312 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 METTL26Q96S19 204 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 RHPN1-AS1Q9BWJ2 59 aa12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 GPN1Q9HCN4 374 aaPredicted RBP12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 STRAPQ9Y3F4 350 aaKnown RBP12.72□□□□□ -0.37
NDUFA3-201ENST00000303553 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 CHEK1O14757 476 aa12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 NPPCP23582 126 aa12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 SPANXN5Q5MJ07 72 aa12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 SEC22CQ9BRL7 303 aa12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
NDUFA3-201ENST00000303553 SSSCA1O60232 199 aa12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 SCGB1D2O95969 90 aa12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 IL5P05113 134 aa12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 POLR2GP62487 172 aaKnown RBP eCLIP12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 ZBTB8BQ8NAP8 495 aaPredicted RBP12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 RAB40CQ96S21 281 aa12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 GSKIPQ9P0R6 139 aa12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 SELENOKQ9Y6D0 94 aa12.7□□□□□ -0.38
NDUFA3-201ENST00000303553 ZFP92A6NM28 416 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 OR11H12B2RN74 326 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 PRAF2O60831 178 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 TOMM40O96008 361 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 CD7P09564 240 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 RD3LP0DJH9 198 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 PAFAH1B2P68402 229 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 IFITM3Q01628 133 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 GAMTQ14353 236 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 GRAMD2BQ96HH9 432 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 RNF2Q99496 336 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 ZMAT4Q9H898 229 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 PSENENQ9NZ42 101 aa12.69□□□□□ -0.38
NDUFA3-201ENST00000303553 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 C5orf51A6NDU8 294 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 H3BP45 60 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 TAS2R30P59541 319 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 NRARPQ7Z6K4 114 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 SMIM8Q96KF7 97 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 ASCL2Q99929 193 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 PFDN2Q9UHV9 154 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 COL7A1Q02388 2944 aa12.68□□□□□ -0.38
NDUFA3-201ENST00000303553 CCSO14618 274 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 TSC22D2O75157 780 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 IL4P05112 153 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 CRYBB3P26998 211 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 CMC4P56277 68 aaPredicted RBP12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 GSG1LQ6UXU4 331 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 SBSPONQ8IVN8 264 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 OR51G1Q8NGK1 321 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 ST8SIA2Q92186 375 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 FAM110AQ9BQ89 295 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 SRD5A3Q9H8P0 318 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 U3KQK5 164 aa12.67□□□□□ -0.38
NDUFA3-201ENST00000303553 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 SNRPGP15A8MWD9 76 aa12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 DEFB125Q8N687 156 aa12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
NDUFA3-201ENST00000303553 PRSS46E5RG02 174 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 L7N2F9 121 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 CFDP00746 253 aaPredicted RBP12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 PSG1P11464 419 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 PVALBP20472 110 aaPredicted RBP12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 VAMP2P63027 116 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 AKR1C1Q04828 323 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
NDUFA3-201ENST00000303553 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms