RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 MBD6Q96DN6 1003 aa9.5□□□□□ -0.89
TPM3-202ENST00000302206 MDFIQ99750 246 aa9.5□□□□□ -0.89
TPM3-202ENST00000302206 TMPRSS5Q9H3S3 457 aa9.5□□□□□ -0.89
TPM3-202ENST00000302206 TNFRSF19Q9NS68 423 aa9.5□□□□□ -0.89
TPM3-202ENST00000302206 TECRQ9NZ01 308 aaKnown RBP9.5□□□□□ -0.89
TPM3-202ENST00000302206 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
TPM3-202ENST00000302206 DMRT1Q9Y5R6 373 aa9.5□□□□□ -0.89
TPM3-202ENST00000302206 CSPG4Q6UVK1 2322 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 PDE6DO43924 150 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 CLN5O75503 358 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 DEFA4P12838 97 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 GCHFRP30047 84 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 TAS2R45P59539 299 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 BPIFB3P59826 476 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 FAM78BQ5VT40 261 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 PQLC2Q6ZP29 291 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 OR4X1Q8NH49 305 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 SPATA3Q8NHX4 192 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 TVP23CQ96ET8 276 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 ZNF48Q96MX3 618 aaPredicted RBP9.49□□□□□ -0.89
TPM3-202ENST00000302206 RASL11BQ9BPW5 248 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 C7orf69Q9H7B7 122 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 SEPSECSQ9HD40 501 aaKnown RBP9.49□□□□□ -0.89
TPM3-202ENST00000302206 DNAJC4Q9NNZ3 241 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
TPM3-202ENST00000302206 NSD1Q96L73 2696 aaPredicted RBP9.49□□□□□ -0.89
TPM3-202ENST00000302206 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 AKAP6Q13023 2319 aa9.49□□□□□ -0.89
TPM3-202ENST00000302206 IGLV11-55A0A075B6I3 123 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
TPM3-202ENST00000302206 IGHV7-81A0A0B4J1V7 117 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 TRAV40A0A0B4J280 105 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 F6UZH7 168 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 H3BQ15 152 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 PAGE4O60829 102 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 EIF3GO75821 320 aaKnown RBP eCLIP9.48□□□□□ -0.89
TPM3-202ENST00000302206 FABP1P07148 127 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 PLP1P60201 277 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
TPM3-202ENST00000302206 AWAT1Q58HT5 328 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 ASPHD1Q5U4P2 390 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 SPATA31B1PQ5VZV4 182 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 PRSS57Q6UWY2 283 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
TPM3-202ENST00000302206 RBM14Q96PK6 669 aaKnown RBP9.48□□□□□ -0.89
TPM3-202ENST00000302206 TUBA4BQ9H853 241 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 TMEM167BQ9NRX6 74 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 HIF1ANQ9NWT6 349 aa9.48□□□□□ -0.89
TPM3-202ENST00000302206 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
TPM3-202ENST00000302206 C7orf77A4D0Y5 90 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 FAM74A7A6NL05 159 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 B4DEV8 164 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 C11orf94C9JXX5 98 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 K7EIM0 57 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 M0R036 132 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 COX7A2P2O60397 106 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 APELAP0DMC3 54 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 EGR2P11161 476 aaPredicted RBP9.47□□□□□ -0.89
TPM3-202ENST00000302206 HIST1H1BP16401 226 aaKnown RBP9.47□□□□□ -0.89
TPM3-202ENST00000302206 NDPQ00604 133 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 RUSC1-AS1Q66K80 236 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 IQCF2Q8IXL9 164 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 SGMS2Q8NHU3 365 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 SMCO4Q9NRQ5 59 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 MOB4Q9Y3A3 225 aa9.47□□□□□ -0.89
TPM3-202ENST00000302206 PUS1Q9Y606 427 aaKnown RBP eCLIP9.47□□□□□ -0.89
TPM3-202ENST00000302206 TRAV30A0A087WSZ9 112 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 A0A087WWC5 75 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 IGLC1P0CG04 106 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 IGHV4-38-2P0DP08 117 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 GATA2P23769 480 aaPredicted RBP9.46□□□□□ -0.9
TPM3-202ENST00000302206 ZNF90Q03938 601 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 C10orf113Q5VZT2 155 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 C5orf56Q8N8D9 126 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 OR4F5Q8NH21 305 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
TPM3-202ENST00000302206 PIFOQ8TCI5 191 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 FANCD2OSQ96PS1 177 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 OR4F4Q96R69 305 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 SMR3AQ99954 134 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 THYN1Q9P016 225 aa9.46□□□□□ -0.9
TPM3-202ENST00000302206 A0A0U1RQK1 487 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 IGHV3-48P01763 117 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
TPM3-202ENST00000302206 CRIP2P52943 208 aaPredicted RBP9.45□□□□□ -0.9
TPM3-202ENST00000302206 CEBPGP53567 150 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
TPM3-202ENST00000302206 PATE2Q6UY27 113 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 STXBP6Q8NFX7 210 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 FAM167A-AS1Q96KT0 104 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 TXN2Q99757 166 aa9.45□□□□□ -0.9
TPM3-202ENST00000302206 FAM103A1Q9BTL3 118 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms