RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TSPAN9O75954 239 aa17.57■□□□□ 0.4
SMAD1-201ENST00000302085 MORN5Q5VZ52 161 aa17.57■□□□□ 0.4
SMAD1-201ENST00000302085 POLQO75417 2590 aa17.57■□□□□ 0.4
SMAD1-201ENST00000302085 TRAV5A0A0B4J249 113 aa17.57■□□□□ 0.4
SMAD1-201ENST00000302085 NPPCP23582 126 aa17.57■□□□□ 0.4
SMAD1-201ENST00000302085 RNF2Q99496 336 aa17.57■□□□□ 0.4
SMAD1-201ENST00000302085 MRPL32Q9BYC8 188 aaKnown RBP17.57■□□□□ 0.4
SMAD1-201ENST00000302085 YTHDF2Q9Y5A9 579 aaKnown RBP17.57■□□□□ 0.4
SMAD1-201ENST00000302085 ANKRD17O75179 2603 aaKnown RBP17.57■□□□□ 0.4
SMAD1-201ENST00000302085 IGLV11-55A0A075B6I3 123 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 J3QKU1 62 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 COX7A2P2O60397 106 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 IGLC1P0CG04 106 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 C8orf88P0DMB2 117 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 GATA3P23771 443 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 KIAA0141Q14154 515 aaPredicted RBP17.56■□□□□ 0.4
SMAD1-201ENST00000302085 C10orf113Q5VZT2 155 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 OR5T1Q8NG75 326 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 OR1L4Q8NGR5 311 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 FAM167A-AS1Q96KT0 104 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 SMCO4Q9NRQ5 59 aa17.56■□□□□ 0.4
SMAD1-201ENST00000302085 ZNF727A8MUV8 499 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 CLN5O75503 358 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 MAPK1IP1LQ8NDC0 245 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 RPUSD4Q96CM3 377 aaKnown RBP17.55■□□□□ 0.4
SMAD1-201ENST00000302085 PFDN5Q99471 154 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 SLC25A2Q9BXI2 301 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 TAS2R45P59539 299 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 TMEM219Q86XT9 240 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 LRRC75A-AS1Q8N1F1 130 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 C5orf56Q8N8D9 126 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 RBM14Q96PK6 669 aaKnown RBP17.55■□□□□ 0.4
SMAD1-201ENST00000302085 SDF2L1Q9HCN8 221 aa17.55■□□□□ 0.4
SMAD1-201ENST00000302085 SH2D7A6NKC9 451 aaPredicted RBP17.54■□□□□ 0.4
SMAD1-201ENST00000302085 RNF223E7ERA6 249 aa17.54■□□□□ 0.4
SMAD1-201ENST00000302085 LOXL1Q08397 574 aaPredicted RBP17.54■□□□□ 0.4
SMAD1-201ENST00000302085 ZNF674Q2M3X9 581 aa17.54■□□□□ 0.4
SMAD1-201ENST00000302085 TIGITQ495A1 244 aa17.54■□□□□ 0.4
SMAD1-201ENST00000302085 PQLC2Q6ZP29 291 aa17.54■□□□□ 0.4
SMAD1-201ENST00000302085 OR51G1Q8NGK1 321 aa17.54■□□□□ 0.4
SMAD1-201ENST00000302085 UHRF2Q96PU4 802 aa17.54■□□□□ 0.4
SMAD1-201ENST00000302085 LINC01548A6NM66 108 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 PDE6DO43924 150 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 BPIFB3P59826 476 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 SGMS2Q8NHU3 365 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 SSX3Q99909 188 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 SMIM7Q9BQ49 75 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 TXNDC17Q9BRA2 123 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 PARLQ9H300 379 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 OR7C2O60412 319 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 IGKV1-17P01599 117 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 ORM2P19652 201 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 ZNF355PQ9NSJ1 428 aa17.53■□□□□ 0.4
SMAD1-201ENST00000302085 VPS13CQ709C8 3753 aa17.52■□□□□ 0.4
SMAD1-201ENST00000302085 ELOA3CA0A087WX78 387 aaPredicted RBP17.52■□□□□ 0.4
SMAD1-201ENST00000302085 OR1B1Q8NGR6 318 aa17.52■□□□□ 0.4
SMAD1-201ENST00000302085 TMEM167BQ9NRX6 74 aa17.52■□□□□ 0.4
SMAD1-201ENST00000302085 S4R3C0 116 aa17.52■□□□□ 0.4
SMAD1-201ENST00000302085 CENPEQ02224 2701 aa17.52■□□□□ 0.4
SMAD1-201ENST00000302085 F6UZH7 168 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 ATP6V0E1O15342 81 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 NDUFB8O95169 186 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 PSG1P11464 419 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 PLP1P60201 277 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 TMEM241Q24JQ0 296 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 HIST2H2BCQ6DN03 193 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 PSMG3-AS1Q96PY0 264 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 MOB4Q9Y3A3 225 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 CELSR2Q9HCU4 2923 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.51■□□□□ 0.397e-8■■■□□ 16.4
SMAD1-201ENST00000302085 AMY1AP04745 511 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 OR10J4P0C629 311 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 Q5PR19 223 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 LINC00305Q7Z4B0 112 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 OR5AU1Q8NGC0 362 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 TUBA4BQ9H853 241 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 NAT8Q9UHE5 227 aa17.51■□□□□ 0.39
SMAD1-201ENST00000302085 COLCA2A8K830 154 aa17.5■□□□□ 0.39
SMAD1-201ENST00000302085 HYPMO75409 117 aa17.5■□□□□ 0.39
SMAD1-201ENST00000302085 TGFAP01135 160 aa17.5■□□□□ 0.39
SMAD1-201ENST00000302085 UNQ5815/PRO19632Q6UWF5 114 aa17.5■□□□□ 0.39
SMAD1-201ENST00000302085 NDUFB4O95168 129 aa17.49■□□□□ 0.39
SMAD1-201ENST00000302085 PNRC1Q12796 327 aaPredicted RBP17.49■□□□□ 0.39
SMAD1-201ENST00000302085 FAM110DQ8TAY7 271 aaPredicted RBP17.49■□□□□ 0.39
SMAD1-201ENST00000302085 OR2J3O76001 311 aa17.49■□□□□ 0.39
SMAD1-201ENST00000302085 ISOC2Q96AB3 205 aa17.49■□□□□ 0.39
SMAD1-201ENST00000302085 TMUB1Q9BVT8 246 aa17.49■□□□□ 0.39
SMAD1-201ENST00000302085 ABCA12Q86UK0 2595 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 A0A087WWC5 75 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 MFAP4P55083 255 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 ECSCRQ19T08 205 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 ARL2-SNX15V9GYD0 113 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 MAP1AP78559 2803 aaPredicted RBP17.48■□□□□ 0.39
SMAD1-201ENST00000302085 SVEP1Q4LDE5 3571 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 SCO2A0A1W2PP80 73 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 B4DEV8 164 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 F8W735 103 aaPredicted RBP17.48■□□□□ 0.39
SMAD1-201ENST00000302085 H3BUX3 64 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 J3QLI3 93 aa17.48■□□□□ 0.39
SMAD1-201ENST00000302085 RD3LP0DJH9 198 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms