RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 FAM110DQ8TAY7 271 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 FOXC2Q99958 501 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 FSHBP01225 129 aa12.37□□□□□ -0.43
HERPUD1-201ENST00000300302 FABP1P07148 127 aa12.37□□□□□ -0.43
HERPUD1-201ENST00000300302 AKIRIN2Q53H80 203 aa12.37□□□□□ -0.43
HERPUD1-201ENST00000300302 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-201ENST00000300302 TMPRSS5Q9H3S3 457 aa12.37□□□□□ -0.43
HERPUD1-201ENST00000300302 DNAJC4Q9NNZ3 241 aa12.37□□□□□ -0.43
HERPUD1-201ENST00000300302 COX7A2P2O60397 106 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 CLN5O75503 358 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 AMY1AP04745 511 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 OR5G3P0C626 314 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 NPBWR1P48145 328 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 TAS2R45P59539 299 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 DEFB112Q30KQ8 113 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 SRP19P09132 144 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 SOHLH1Q5JUK2 328 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 SPNS3Q6ZMD2 512 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 TEX29Q8N6K0 151 aa12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 TECRQ9NZ01 308 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-201ENST00000300302 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 TRAV30A0A087WSZ9 112 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 MDFIC2A0A1B0GVS7 189 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 SNAPINO95295 136 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 MFAP4P55083 255 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 MEF2BQ02080 365 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 C10orf113Q5VZT2 155 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 SPATA31B1PQ5VZV4 182 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 MIR17HGQ75NE6 70 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 BCL6BQ8N143 479 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 TMEM37Q8WXS4 190 aa12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 ZNF48Q96MX3 618 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-201ENST00000300302 PSMB11A5LHX3 300 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 SCGB2A1O75556 95 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 FASNP49327 2511 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 LINC01548A6NM66 108 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 GNG7O60262 68 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 OR2J3O76001 311 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 GCHFRP30047 84 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 GSX1Q9H4S2 264 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 ZNF355PQ9NSJ1 428 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 DOK5Q9P104 306 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 FBXL7Q9UJT9 491 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 KLK9Q9UKQ9 250 aa12.34□□□□□ -0.43
HERPUD1-201ENST00000300302 PDZD2O15018 2839 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 AKAP9Q99996 3911 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 TRAV41A0A0B4J266 112 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 SMAD7O15105 426 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 PAGE4O60829 102 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 C8orf88P0DMB2 117 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 IER3P46695 156 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 CEBPGP53567 150 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 BTN1A1Q13410 526 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 NKX6-2Q9C056 277 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-201ENST00000300302 G3V318 75 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 HYPMO75409 117 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 NDUFB8O95169 186 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 IGHV4-59P01825 116 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 IGHG2P01859 326 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 IGF1P05019 195 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 ORM2P19652 201 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 PLP1P60201 277 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 TIGITQ495A1 244 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 Q56UQ5 140 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 OR1B1Q8NGR6 318 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 SUN5Q8TC36 379 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 TXN2Q99757 166 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 TXNDC17Q9BRA2 123 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 ABCA1O95477 2261 aa12.32□□□□□ -0.44
HERPUD1-201ENST00000300302 OR7C2O60412 319 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 IGKV1-17P01599 117 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 PSG1P11464 419 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 NECAP1Q8NC96 275 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 TMA7Q9Y2S6 64 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 TRBV9A0A0B4J1U6 114 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 C11orf94C9JXX5 98 aa12.31□□□□□ -0.44
HERPUD1-201ENST00000300302 TMEM250H0YL14 139 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms