RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 A8MWP6 167 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 M0QZK8 103 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 ZNF207O43670 478 aaKnown RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 GGCTO75223 188 aaKnown RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 MT-ND6P03923 174 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 BSPH1Q075Z2 132 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 SPRNQ5BIV9 151 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 LSM4Q9Y4Z0 139 aaKnown RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 PIEZO1Q92508 2521 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 PEX7O00628 323 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 NUDT3O95989 172 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 CD3EP07766 207 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 NPPCP23582 126 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 PNKDQ8N490 385 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 MBNL3Q9NUK0 354 aaKnown RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 MRPS18CQ9Y3D5 142 aaKnown RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 SRRM5B3KS81 715 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 S100A4P26447 101 aaKnown RBP10.93□□□□□ -0.66
CASC4-201ENST00000299957 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.93□□□□□ -0.66
CASC4-201ENST00000299957 IL4P05112 153 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 RBM14Q96PK6 669 aaKnown RBP10.93□□□□□ -0.66
CASC4-201ENST00000299957 TXNDC17Q9BRA2 123 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
CASC4-201ENST00000299957 YPEL1O60688 119 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 YPEL2Q96QA6 119 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
CASC4-201ENST00000299957 TEX50A0A1B0GTY4 177 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 TBR1Q16650 682 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 ACTL10Q5JWF8 245 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 KLK15Q9H2R5 256 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 OR52E5Q8NH55 327 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 UPK2O00526 184 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 PPIFP30405 207 aaKnown RBP10.92□□□□□ -0.66
CASC4-201ENST00000299957 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 IGHV1-46P01743 117 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 MBNL2Q5VZF2 373 aaKnown RBP10.92□□□□□ -0.66
CASC4-201ENST00000299957 Q6ZS49 121 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 ODF3L1Q8IXM7 274 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 WDR31Q8NA23 367 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 MDS2Q8NDY4 140 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 ZNF738Q8NE65 137 aa10.92□□□□□ -0.66
CASC4-201ENST00000299957 FOXA2Q9Y261 457 aaPredicted RBP10.92□□□□□ -0.66
CASC4-201ENST00000299957 DSCAML1Q8TD84 2053 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 OR4C46A6NHA9 309 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 SS18L1O75177 396 aaPredicted RBP10.91□□□□□ -0.66
CASC4-201ENST00000299957 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 NDFIP1Q9BT67 221 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 HTN1P15515 57 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 PPOXP50336 477 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 UTF1Q5T230 341 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 ARHGAP32A7KAX9 2087 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.91□□□□□ -0.66
CASC4-201ENST00000299957 TWIST1Q15672 202 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 NEUROG1Q92886 237 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
CASC4-201ENST00000299957 ZNF324O75467 553 aaPredicted RBP10.9□□□□□ -0.66
CASC4-201ENST00000299957 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.66
CASC4-201ENST00000299957 DIAPH2-AS1Q14236 149 aa10.9□□□□□ -0.66
CASC4-201ENST00000299957 MGAQ8IWI9 3026 aa10.9□□□□□ -0.66
CASC4-201ENST00000299957 CORTO00230 105 aa10.9□□□□□ -0.66
CASC4-201ENST00000299957 CDX4O14627 284 aaPredicted RBP10.9□□□□□ -0.66
CASC4-201ENST00000299957 CD69Q07108 199 aa10.9□□□□□ -0.66
CASC4-201ENST00000299957 IGFL4Q6B9Z1 124 aa10.9□□□□□ -0.66
CASC4-201ENST00000299957 SCRT1Q9BWW7 348 aa10.9□□□□□ -0.66
CASC4-201ENST00000299957 CDC42EP3Q9UKI2 254 aa10.9□□□□□ -0.67
CASC4-201ENST00000299957 ZFYVE26Q68DK2 2539 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 PPIAL4CA0A0B4J2A2 164 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 C3orf79P0CE67 100 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 PPIAL4GP0DN37 164 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 SELENOTP62341 195 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 Q6ZWC4 215 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
CASC4-201ENST00000299957 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 RNF138Q8WVD3 245 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 TRBV6-6A0A0A6YYG2 114 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 MAJINQ3KP22 176 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 ZNF474Q6S9Z5 364 aaPredicted RBP10.89□□□□□ -0.67
CASC4-201ENST00000299957 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 TRBV20OR9-2A0A075B6H5 130 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 ERVK11-1P61568 191 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 PARD6GQ9BYG4 376 aaPredicted RBP10.89□□□□□ -0.67
CASC4-201ENST00000299957 FBXL7Q9UJT9 491 aa10.89□□□□□ -0.67
CASC4-201ENST00000299957 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 AREGP15514 252 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 SRSF7Q16629 238 aaKnown RBP eCLIP10.88□□□□□ -0.67
CASC4-201ENST00000299957 LBHQ53QV2 105 aaPredicted RBP10.88□□□□□ -0.67
CASC4-201ENST00000299957 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 STXBP6Q8NFX7 210 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 J3QW42 95 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms