RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 HLA-DRB5Q30154 266 aa8.24□□□□□ -1.09
FOXN4-201ENST00000299162 TMEM200BQ69YZ2 307 aa8.24□□□□□ -1.09
FOXN4-201ENST00000299162 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
FOXN4-201ENST00000299162 NHLRC2Q8NBF2 726 aa8.24□□□□□ -1.09
FOXN4-201ENST00000299162 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
FOXN4-201ENST00000299162 F2RL2O00254 374 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 CCL21O00585 134 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 NDUFB3O43676 98 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 CT45A6P0DMU7 189 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 CT45A5P0DMU8 189 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 CT45A7P0DMV0 189 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 IGFBP2P18065 325 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 OR10G8Q8NGN5 311 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 ZNF714Q96N38 554 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 FOXH1O75593 365 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 APOBEC3AP31941 199 aaPredicted RBP8.23□□□□□ -1.09
FOXN4-201ENST00000299162 SRP14P37108 136 aaKnown RBP8.23□□□□□ -1.09
FOXN4-201ENST00000299162 CDSNQ15517 529 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 MGST2Q99735 147 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 PLEKHA3Q9HB20 300 aa8.23□□□□□ -1.09
FOXN4-201ENST00000299162 FCN3O75636 299 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 OR10J4P0C629 311 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 SAA1P0DJI8 122 aaPredicted RBP8.22□□□□□ -1.09
FOXN4-201ENST00000299162 LGALS7P47929 136 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 PDLIM4P50479 330 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 RNASE6Q93091 150 aaKnown RBP8.22□□□□□ -1.09
FOXN4-201ENST00000299162 SMIM12Q96EX1 92 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 PYGO2Q9BRQ0 406 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 CELSR1Q9NYQ6 3014 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 RTL8BQ17RB0 113 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.22□□□□□ -1.09
FOXN4-201ENST00000299162 FAM169BQ8N8A8 192 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 OR4P4Q8NGL7 312 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 OCC1Q8TAD7 63 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 ELOVL5Q9NYP7 299 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 CTSZQ9UBR2 303 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 E7EUB6 86 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 TMEM250H0YL14 139 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 WNT2P09544 360 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 CD24P25063 80 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 RBPJQ06330 500 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 LRRC10Q5BKY1 277 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 HCP5Q6MZN7 132 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 ZNF439Q8NDP4 499 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 RCHY1Q96PM5 261 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 COMMD5Q9GZQ3 224 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 GNB4Q9HAV0 340 aa8.22□□□□□ -1.09
FOXN4-201ENST00000299162 RPUSD1Q9UJJ7 312 aaKnown RBP8.22□□□□□ -1.09
FOXN4-201ENST00000299162 C15orf61A6NNL5 157 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 SLC25A17O43808 307 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 CA1P00915 261 aaPredicted RBP8.21□□□□□ -1.09
FOXN4-201ENST00000299162 CFHR2P36980 270 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 PRRX1P54821 245 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 RPL15P61313 204 aaKnown RBP8.21□□□□□ -1.09
FOXN4-201ENST00000299162 HSPE1P61604 102 aaKnown RBP8.21□□□□□ -1.09
FOXN4-201ENST00000299162 LY6DQ14210 128 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 PRR27Q6MZM9 219 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 TEX43Q6ZNM6 134 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 C1orf174Q8IYL3 243 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 BORCS7Q96B45 105 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 SGK494Q96LW2 274 aa8.21□□□□□ -1.09
FOXN4-201ENST00000299162 DSCAML1Q8TD84 2053 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 VSTM5A8MXK1 200 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 TMEM178BH3BS89 294 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 K7ENP7 123 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 STAG3L3P0CL85 134 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 SRIP30626 198 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 RANP62826 216 aaKnown RBP8.21□□□□□ -1.1
FOXN4-201ENST00000299162 STPG3Q8N7X2 389 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 OR9G1Q8NH87 305 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 RITA1Q96K30 269 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 MCRIP2Q9BUT9 160 aaKnown RBP8.21□□□□□ -1.1
FOXN4-201ENST00000299162 GGTLC1Q9BX51 225 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 TP53TG3Q9ULZ0 132 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 WDR83OSQ9Y284 106 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 TRBV20OR9-2A0A075B6H5 130 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 OR7C2O60412 319 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 CGB3P0DN86 165 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 CGB7P0DN87 165 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 VDAC2P45880 294 aaPredicted RBP8.21□□□□□ -1.1
FOXN4-201ENST00000299162 SLAQ13239 276 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 SCGB2A2Q13296 93 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 OR2T6Q8NHC8 308 aa8.21□□□□□ -1.1
FOXN4-201ENST00000299162 HYPMO75409 117 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 APOA2P02652 100 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 CD3EP07766 207 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 CEACAM3P40198 252 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 GATA4P43694 442 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 SSBP3Q9BWW4 388 aaPredicted RBP8.2□□□□□ -1.1
FOXN4-201ENST00000299162 HRNRQ86YZ3 2850 aaPredicted RBP8.2□□□□□ -1.1
FOXN4-201ENST00000299162 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 IGHV1-69-2A0A0G2JMI3 117 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 SNAI2O43623 268 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 DDB2Q92466 427 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
FOXN4-201ENST00000299162 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 ARL2-SNX15V9GYD0 113 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms