RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PPIAL4AQ9Y536 164 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 DIRC3C9JPN6 131 aa19.67■□□□□ 0.74
SPTSSA-201ENST00000298130 ESDP10768 282 aa19.67■□□□□ 0.74
SPTSSA-201ENST00000298130 ZNF25P17030 456 aaPredicted RBP19.67■□□□□ 0.74
SPTSSA-201ENST00000298130 IGKV1D-37A0A075B6S9 117 aa19.67■□□□□ 0.74
SPTSSA-201ENST00000298130 CAMPP49913 170 aa19.67■□□□□ 0.74
SPTSSA-201ENST00000298130 A0A0G2JNJ9 132 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 CD24P25063 80 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 MFAP2P55001 183 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 GDF5OSQ5U4N7 250 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 TMEM108Q6UXF1 575 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 TMEM68Q96MH6 324 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 CTSZQ9UBR2 303 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 Q9UFV3 132 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 A0A1W2PN81 502 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 KLK10O43240 276 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 AMY1AP04745 511 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 CNTFRP26992 372 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 LINC00305Q7Z4B0 112 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 OR1B1Q8NGR6 318 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 LRBAP50851 2863 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 SMIM27A0A1W2PRY6 76 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 TNFRSF1AP19438 455 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 TMEM183BQ1AE95 376 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 ZNF841Q6ZN19 808 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 ZNF329Q86UD4 541 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 Q8N976 141 aa19.66■□□□□ 0.74
SPTSSA-201ENST00000298130 CUL9Q8IWT3 2517 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 PPIAL4EA0A075B759 164 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 A0A1W2PPI3 338 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 PPIAL4DF5H284 164 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 APCSP02743 223 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 PPIAL4FP0DN26 164 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 CEACAM8P31997 349 aaPredicted RBP19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 ZNF124Q15973 351 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 OR4C13Q8NGP0 309 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 ZNF586Q9NXT0 402 aa19.65■□□□□ 0.74
SPTSSA-201ENST00000298130 TOX4O94842 621 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 TFPI2P48307 235 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 MAJINQ3KP22 176 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 TMEM177Q53S58 311 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 LCN12Q6JVE5 192 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 WDR73Q6P4I2 378 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 NUDT10Q8NFP7 164 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 NUDT11Q96G61 164 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 MIEN1Q9BRT3 115 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 ZNF331Q9NQX6 463 aaPredicted RBP19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 IGLV2-23P01705 113 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 KCNS1Q96KK3 526 aa19.64■□□□□ 0.73
SPTSSA-201ENST00000298130 NBASA2RRP1 2371 aa19.63■□□□□ 0.73
SPTSSA-201ENST00000298130 TRBV9A0A0B4J1U6 114 aa19.63■□□□□ 0.73
SPTSSA-201ENST00000298130 PEX7O00628 323 aa19.63■□□□□ 0.73
SPTSSA-201ENST00000298130 ARL2-SNX15V9GYD0 113 aa19.63■□□□□ 0.73
SPTSSA-201ENST00000298130 C22orf46C9J442 243 aa19.63■□□□□ 0.73
SPTSSA-201ENST00000298130 MALRD1Q5VYJ5 2156 aa19.63■□□□□ 0.73
SPTSSA-201ENST00000298130 C16orf97H3BN30 126 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 THBDP07204 575 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 NUP35Q8NFH5 326 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 FAM57AQ8TBR7 257 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 TSKUQ8WUA8 353 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 CACNG8Q8WXS5 425 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 FXYD5Q96DB9 178 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 TCRBV4S1A1TA0A5B7 111 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 TMEM178BH3BS89 294 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 TMEM167AQ8TBQ9 72 aa19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 MRPL32Q9BYC8 188 aaKnown RBP19.62■□□□□ 0.73
SPTSSA-201ENST00000298130 IZUMO1RA6ND01 250 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 NDUFB3O43676 98 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 IGFL3Q6UXB1 125 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 C20orf144Q9BQM9 153 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 C19orf24Q9BVV8 132 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 ABCA4P78363 2273 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 VWC2LB2RUY7 222 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 LYNX1G3V0Z9 82 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 MT-ND6P03923 174 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 C3orf79P0CE67 100 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 LYNX1P0DP58 116 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 NIT1Q86X76 327 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 IGFBPL1Q8WX77 278 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 ZNF318Q5VUA4 2279 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 ZNF324O75467 553 aaPredicted RBP19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 Q71RC1 249 aaPredicted RBP19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 TCF24Q7RTU0 167 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 PNKDQ8N490 385 aa19.61■□□□□ 0.73
SPTSSA-201ENST00000298130 PGPA6NDG6 321 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 SLC25A5P05141 298 aaKnown RBP19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 SSUH2Q9Y2M2 353 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 CEP295Q9C0D2 2601 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 HLA-DQA1P01909 254 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 SPATA45Q537H7 98 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 ASCL2Q99929 193 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 TNFRSF19Q9NS68 423 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 WASHC3Q9Y3C0 194 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 DCHS2Q6V1P9 2916 aa19.6■□□□□ 0.73
SPTSSA-201ENST00000298130 FSTL3O95633 263 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 FAM87AP0C7U9 286 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 TNXAQ16473 311 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 LINC00322Q6ZN03 302 aaPredicted RBP19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 SPACA3Q8IXA5 215 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 NUP37Q8NFH4 326 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms