RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 DHRS13Q6UX07 377 aa8.25□□□□□ -1.09
CCDC36-201ENST00000296449 PATE2Q6UY27 113 aa8.25□□□□□ -1.09
CCDC36-201ENST00000296449 ZNF841Q6ZN19 808 aa8.25□□□□□ -1.09
CCDC36-201ENST00000296449 SMIM12Q96EX1 92 aa8.25□□□□□ -1.09
CCDC36-201ENST00000296449 URB1-AS1Q96HZ7 61 aa8.25□□□□□ -1.09
CCDC36-201ENST00000296449 RPUSD1Q9UJJ7 312 aaKnown RBP8.25□□□□□ -1.09
CCDC36-201ENST00000296449 ZFHX4Q86UP3 3567 aa8.25□□□□□ -1.09
CCDC36-201ENST00000296449 A0A1B0GXF2 115 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 E7EUB6 86 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 FSTL3O95633 263 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 CD59P13987 128 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 RBX1P62877 108 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 GNG5P63218 68 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 PRR31Q5SQ13 230 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 DEFB108BQ8NET1 73 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 OR1L4Q8NGR5 311 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 FXYD5Q96DB9 178 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 GAFA1Q96PS6 74 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 CRXO43186 299 aaPredicted RBP8.24□□□□□ -1.09
CCDC36-201ENST00000296449 VHLLQ6RSH7 139 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 FAM216BQ8N7L0 139 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 CCL13Q99616 98 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 FNDC4Q9H6D8 234 aaPredicted RBP8.24□□□□□ -1.09
CCDC36-201ENST00000296449 CLEC5AQ9NY25 188 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 RNF7Q9UBF6 113 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 DKK4Q9UBT3 224 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 PROCRQ9UNN8 238 aa8.24□□□□□ -1.09
CCDC36-201ENST00000296449 MYCNOSP40205 109 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 GATA4P43694 442 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 ERHP84090 104 aaKnown RBP8.23□□□□□ -1.09
CCDC36-201ENST00000296449 FAM120AOSQ5T036 256 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 OSR1Q8TAX0 266 aaPredicted RBP8.23□□□□□ -1.09
CCDC36-201ENST00000296449 ZNF596Q8TC21 504 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 HARBI1Q96MB7 349 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 MRPL20Q9BYC9 149 aaKnown RBP8.23□□□□□ -1.09
CCDC36-201ENST00000296449 IGKV1D-37A0A075B6S9 117 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 IGHV2-70DA0A0C4DH43 119 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
CCDC36-201ENST00000296449 M0R1B8 84 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 TM4SF5O14894 197 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 IGHV3-48P01763 117 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 TNFSF4P23510 183 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 ZNF833PQ6ZTB9 187 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 NPIPB3Q92617 1050 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 TMEM70Q9BUB7 260 aa8.23□□□□□ -1.09
CCDC36-201ENST00000296449 ZNF430Q9H8G1 570 aaPredicted RBP8.23□□□□□ -1.09
CCDC36-201ENST00000296449 LOC105371242A0A075B767 164 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 TCRBV4S1A1TA0A5B7 111 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 PLAUP00749 431 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 GLRXP35754 106 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 CA7P43166 264 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 WT1-ASQ06250 92 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 HES3Q5TGS1 186 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 TCF24Q7RTU0 167 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 C22orf15Q8WYQ4 148 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 SARAFQ96BY9 339 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 SGK494Q96LW2 274 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 ST20Q9HBF5 79 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 TP73-AS1Q9UF72 201 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 SOX21Q9Y651 276 aaPredicted RBP8.22□□□□□ -1.09
CCDC36-201ENST00000296449 ICE1Q9Y2F5 2266 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 IGLV3-9A0A075B6K5 115 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 CGB1A6NKQ9 187 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 REG1BP48304 166 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 CCL11P51671 97 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 FBLN7Q53RD9 439 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 CT83Q5H943 113 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 ZNF788Q6ZQV5 615 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 SSX8Q7RTT4 187 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 FDCSPQ8NFU4 85 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
CCDC36-201ENST00000296449 MRPL36Q9P0J6 103 aaKnown RBP8.22□□□□□ -1.09
CCDC36-201ENST00000296449 EPDR1Q9UM22 224 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 KLF12Q9Y4X4 402 aa8.22□□□□□ -1.09
CCDC36-201ENST00000296449 RAI1Q7Z5J4 1906 aaPredicted RBP8.22□□□□□ -1.09
CCDC36-201ENST00000296449 ASPMQ8IZT6 3477 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 NAV3Q8IVL0 2385 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 M0QZ24 198 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 APOA2P02652 100 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 CDKN1BP46527 198 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 HBBP68871 147 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 LRRC10Q5BKY1 277 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 C10orf55Q5SWW7 151 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.09
CCDC36-201ENST00000296449 LINC00305Q7Z4B0 112 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 THAP8Q8NA92 274 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 ST6GALNAC6Q969X2 333 aa8.21□□□□□ -1.09
CCDC36-201ENST00000296449 ARFGEF3Q5TH69 2177 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 OR4C46A6NHA9 309 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
CCDC36-201ENST00000296449 CD24P25063 80 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
CCDC36-201ENST00000296449 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 PDPNQ86YL7 162 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 STXBP6Q8NFX7 210 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 MLST8Q9BVC4 326 aa8.21□□□□□ -1.1
CCDC36-201ENST00000296449 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
CCDC36-201ENST00000296449 IGHV1-24A0A0C4DH33 117 aa8.2□□□□□ -1.1
CCDC36-201ENST00000296449 CDX4O14627 284 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms