RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 Q9H3A6 140 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 SDF2L1Q9HCN8 221 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 SAP30O75446 220 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 ZNF506Q5JVG8 444 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 DOCK7Q96N67 2140 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 OTORQ9NRC9 128 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 NOTCH4Q99466 2003 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 TRBV6-6A0A0A6YYG2 114 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 ID3Q02535 119 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 LYPD2Q6UXB3 125 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 PLXNA4Q9HCM2 1894 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 WNK2Q9Y3S1 2297 aa14.58□□□□□ -0.08
CDC42EP3-201ENST00000295324 ZNF585BQ52M93 769 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 TRBV20OR9-2A0A075B6H5 130 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 SFRP2Q96HF1 295 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 KCNS1Q96KK3 526 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 UQCR10Q9UDW1 63 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 RNASE4P34096 147 aaKnown RBP14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 Q6P435 159 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 TEX38Q6PEX7 206 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 LEPP41159 167 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 C15orf32Q32M92 178 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 TTC32Q5I0X7 151 aa14.57□□□□□ -0.08
CDC42EP3-201ENST00000295324 KIAA1671Q9BY89 1806 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 NLRC5Q86WI3 1866 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 CD5P06127 495 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 SPSB3Q6PJ21 355 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 CXorf65A6NEN9 183 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 ERASQ7Z444 233 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 Q96MF0 132 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 HIST1H4GQ99525 98 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 MRPL18Q9H0U6 180 aaKnown RBP14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 MBNL3Q9NUK0 354 aaKnown RBP14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 RNF114Q9Y508 228 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 FER1L5A0AVI2 2057 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 PTPRDP23468 1912 aa14.56□□□□□ -0.08
CDC42EP3-201ENST00000295324 LDLRAD4O15165 306 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 COQ2Q96H96 371 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 TMEM101Q96IK0 257 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 FAM215AQ9Y5M1 114 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 SAA4P35542 130 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 C10orf55Q5SWW7 151 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 LRTM2Q8N967 370 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 ASCL2Q99929 193 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 HBBP68871 147 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 FRMPD3Q5JV73 1810 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 TRBV9A0A0B4J1U6 114 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 LEPROTL1O95214 131 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 TDGF1P13385 188 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 OR10W1Q8NGF6 305 aa14.55□□□□□ -0.08
CDC42EP3-201ENST00000295324 CREBBPQ92793 2442 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 FAM71F2Q6NXP2 309 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 PUSL1Q8N0Z8 303 aaKnown RBP14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 ABCA1O95477 2261 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 DDTP30046 118 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 H0YJW9 148 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 SLC25A34Q6PIV7 304 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 USMG5Q96IX5 58 aa14.54□□□□□ -0.08
CDC42EP3-201ENST00000295324 Q6AWC8 147 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 RNASE1P07998 156 aaKnown RBP14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 GATA4P43694 442 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 MPDZO75970 2070 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 FABP5P3A8MUU1 101 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 EFNB3Q15768 340 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 KLK15Q9H2R5 256 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 CADP27708 2225 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 LHFPL1Q86WI0 220 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 Q8TCH9 128 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 GLMPQ8WWB7 406 aa14.53□□□□□ -0.08
CDC42EP3-201ENST00000295324 SOD3P08294 240 aa14.52□□□□□ -0.08
CDC42EP3-201ENST00000295324 UBE2E1P51965 193 aa14.52□□□□□ -0.08
CDC42EP3-201ENST00000295324 SLX1AQ9BQ83 275 aa14.52□□□□□ -0.08
CDC42EP3-201ENST00000295324 WDR83OSQ9Y284 106 aa14.52□□□□□ -0.08
CDC42EP3-201ENST00000295324 ANAPC1Q9H1A4 1944 aa14.52□□□□□ -0.08
CDC42EP3-201ENST00000295324 OR10AG1Q8NH19 301 aa14.52□□□□□ -0.08
CDC42EP3-201ENST00000295324 TGIF2-C20orf24A0A0A6YYL0 155 aa14.52□□□□□ -0.09
CDC42EP3-201ENST00000295324 CD33P20138 364 aa14.52□□□□□ -0.09
CDC42EP3-201ENST00000295324 PCP4P48539 62 aa14.52□□□□□ -0.09
CDC42EP3-201ENST00000295324 DEFB121Q5J5C9 76 aa14.52□□□□□ -0.09
CDC42EP3-201ENST00000295324 OVOL1O14753 267 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 LGALS3P17931 250 aaKnown RBP14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 A0A1B0GUT8 65 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 SRIP30626 198 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 TRBV7-1A0A0A6YYK4 115 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 A0A1B0GWJ7 208 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 SIGLEC15Q6ZMC9 328 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 TMEM136Q6ZRR5 245 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 SCN8AQ9UQD0 1980 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 CD55P08174 381 aa14.51□□□□□ -0.09
CDC42EP3-201ENST00000295324 SCO2A0A1W2PP80 73 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 REC114Q7Z4M0 266 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 MAPK1IP1LQ8NDC0 245 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 TMEM70Q9BUB7 260 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 SIGLEC9Q9Y336 463 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 TECTAO75443 2155 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 TRAV21A0A0B4J279 112 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms