RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 C15orf62A8K5M9 175 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 M0R036 132 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 CST7O76096 145 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 SCAF4O95104 1147 aaKnown RBP13.93□□□□□ -0.18
CCDC78-201ENST00000293889 RAB5AP20339 215 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 ICAM4Q14773 271 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 AKR1C8PQ5T2L2 129 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 MBD3L1Q8WWY6 194 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 SERTAD4Q9NUC0 356 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 IFNA5P01569 189 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 NPY1RP25929 384 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 KRTAP21-3Q3LHN1 58 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 ZNF114Q8NC26 417 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 OR2T6Q8NHC8 308 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 FAM110DQ8TAY7 271 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-201ENST00000293889 RARRES2Q99969 163 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
CCDC78-201ENST00000293889 COL6A5A8TX70 2615 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 SOX15O60248 233 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
CCDC78-201ENST00000293889 S100A8P05109 93 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 PPIFP30405 207 aaKnown RBP13.92□□□□□ -0.18
CCDC78-201ENST00000293889 RPL35P42766 123 aaKnown RBP13.92□□□□□ -0.18
CCDC78-201ENST00000293889 MEOX2P50222 304 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 MFAP2P55001 183 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 RPP30P78346 268 aaKnown RBP13.92□□□□□ -0.18
CCDC78-201ENST00000293889 C2orf83Q53S99 150 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 TMEM14EPQ6UXP3 125 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 OR1P1Q8NH06 330 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 MDFIQ99750 246 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 C16orf95Q9H693 158 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 DMRT1Q9Y5R6 373 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 F11RQ9Y624 299 aaKnown RBP13.92□□□□□ -0.18
CCDC78-201ENST00000293889 RFNGQ9Y644 331 aa13.92□□□□□ -0.18
CCDC78-201ENST00000293889 CXorf65A6NEN9 183 aa13.91□□□□□ -0.18
CCDC78-201ENST00000293889 METTL15P1P0C7V9 234 aa13.91□□□□□ -0.18
CCDC78-201ENST00000293889 DEFA4P12838 97 aa13.91□□□□□ -0.18
CCDC78-201ENST00000293889 SUB1P53999 127 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC78-201ENST00000293889 SERF2P84101 59 aa13.91□□□□□ -0.18
CCDC78-201ENST00000293889 CFHR3Q02985 330 aa13.91□□□□□ -0.18
CCDC78-201ENST00000293889 LOC102723971A0A1B0GUV8 181 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 NDUFA7O95182 113 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 AKR1D1P51857 326 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-201ENST00000293889 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-201ENST00000293889 C2CD4CQ8TF44 421 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 C12orf57Q99622 126 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 C19orf24Q9BVV8 132 aa13.9□□□□□ -0.18
CCDC78-201ENST00000293889 AKR1C3P42330 323 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 RAB11AP62491 216 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 PVRIGQ6DKI7 326 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 SLC25A24Q6NUK1 477 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 ZNF329Q86UD4 541 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 TMEM217Q8N7C4 229 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 FANCD2OSQ96PS1 177 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 TIMM9Q9Y5J7 89 aa13.9□□□□□ -0.19
CCDC78-201ENST00000293889 PMS2P5A8MQ11 134 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 H3BQ15 152 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 CTAG1AP78358 180 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 RUNX1Q01196 453 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 ARL16Q0P5N6 197 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 OR8G2PQ6IF36 304 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 C10orf99Q6UWK7 81 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 HAPLN4Q86UW8 402 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 ZFP82Q8N141 532 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 LINC01006Q8NI28 216 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 ZNF355PQ9NSJ1 428 aa13.89□□□□□ -0.19
CCDC78-201ENST00000293889 IGLV11-55A0A075B6I3 123 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 B4DEV8 164 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 EIF3GO75821 320 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC78-201ENST00000293889 IGLV1-40P01703 118 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 SMIM6P0DI80 62 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 SNRPEP62304 92 aaKnown RBP13.88□□□□□ -0.19
CCDC78-201ENST00000293889 HBG1P69891 147 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 HBG2P69892 147 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 OR1L6Q8NGR2 347 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 SCGB1C1Q8TD33 95 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 PINX1Q96BK5 328 aaKnown RBP13.88□□□□□ -0.19
CCDC78-201ENST00000293889 TVP23CQ96ET8 276 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 MISP3Q96FF7 219 aa13.88□□□□□ -0.19
CCDC78-201ENST00000293889 PSMB11A5LHX3 300 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 OR2C1O95371 312 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 KLK9Q2XQG4 91 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
CCDC78-201ENST00000293889 ISOC2Q96AB3 205 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 MS4A10Q96PG2 267 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 TCEAL7Q9BRU2 100 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 C20orf24Q9BUV8 137 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 KLK9Q9UKQ9 250 aa13.87□□□□□ -0.19
CCDC78-201ENST00000293889 PRSS46E5RG02 174 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 IGHG4P01861 327 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 SLC35B1P78383 322 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 HAGHQ16775 308 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 ATP6V1FQ16864 119 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 FAM24BQ8N5W8 94 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 OR4F5Q8NH21 305 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
CCDC78-201ENST00000293889 PUS1Q9Y606 427 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC78-201ENST00000293889 TRBV9A0A0B4J1U6 114 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms