RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SLC25A17O43808 307 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 RBP4P02753 201 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 PRRX1P54821 245 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 VWC2Q2TAL6 325 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 OR1L4Q8NGR5 311 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 CHRDL1Q9BU40 450 aa10.98□□□□□ -0.65
SCAF4-201ENST00000286835 CD3EP07766 207 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 LINC00305Q7Z4B0 112 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 PRSS33Q8NF86 280 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 GP6Q9HCN6 339 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 NAV3Q8IVL0 2385 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 WDFY3Q8IZQ1 3526 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 PROP1O75360 226 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 CT45A6P0DMU7 189 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 CT45A5P0DMU8 189 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 CT45A7P0DMV0 189 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 UQCRFS1P47985 274 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 TIMD4Q96H15 378 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 PEX7O00628 323 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 SS18L1O75177 396 aaPredicted RBP10.97□□□□□ -0.65
SCAF4-201ENST00000286835 WISP2O76076 250 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 SFTPCP11686 197 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 Q0VG73 95 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 RNF114Q9Y508 228 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 WDFY4Q6ZS81 3184 aa10.97□□□□□ -0.65
SCAF4-201ENST00000286835 KBTBD11-OT1A0A1B0GTJ5 212 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 C15orf65H3BRN8 121 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 IGLC2P0DOY2 106 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 IGLC3P0DOY3 106 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 CCL3L1P16619 93 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 ZNF138P52744 262 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 SELENOTP62341 195 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 OR10J3Q5JRS4 329 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 KIAA1549Q9HCM3 1950 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 CNIH1O95406 144 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 HES1Q14469 280 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 NUDT10Q8NFP7 164 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 OR52E5Q8NH55 327 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 NUDT11Q96G61 164 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
SCAF4-201ENST00000286835 IGHV1-18A0A0C4DH31 117 aa10.96□□□□□ -0.66
SCAF4-201ENST00000286835 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.66
SCAF4-201ENST00000286835 CORTO00230 105 aa10.96□□□□□ -0.66
SCAF4-201ENST00000286835 COTL1Q14019 142 aa10.96□□□□□ -0.66
SCAF4-201ENST00000286835 ZNF841Q6ZN19 808 aa10.96□□□□□ -0.66
SCAF4-201ENST00000286835 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.66
SCAF4-201ENST00000286835 MRPL20Q9BYC9 149 aaKnown RBP10.96□□□□□ -0.66
SCAF4-201ENST00000286835 SRRM5B3KS81 715 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 LINC00614P0C842 121 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 TSPOP30536 169 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 TEX50A0A1B0GTY4 177 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 hDV102S1A0JD36 115 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 P0C879 139 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 TCF15Q12870 199 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 ALKBH7Q9BT30 221 aaPredicted RBP10.95□□□□□ -0.66
SCAF4-201ENST00000286835 CA7P43166 264 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 SPRNQ5BIV9 151 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 FA2HQ7L5A8 372 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 OR8A1Q8NGG7 326 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 C18orf32Q8TCD1 76 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 ASCL2Q99929 193 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 GSX1Q9H4S2 264 aaPredicted RBP10.95□□□□□ -0.66
SCAF4-201ENST00000286835 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
SCAF4-201ENST00000286835 TNFRSF19Q9NS68 423 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 UPK2O00526 184 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 KIR2DL2P43627 348 aaPredicted RBP10.95□□□□□ -0.66
SCAF4-201ENST00000286835 NIT1Q86X76 327 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 SLC25A33Q9BSK2 321 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 SFXN3Q9BWM7 321 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 ASCL3Q9NQ33 180 aa10.95□□□□□ -0.66
SCAF4-201ENST00000286835 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 MUC21Q5SSG8 566 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 MAP1LC3CQ9BXW4 147 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 SLC25A10Q9UBX3 287 aaPredicted RBP10.94□□□□□ -0.66
SCAF4-201ENST00000286835 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
SCAF4-201ENST00000286835 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 A8MWL6 223 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 PPOXP50336 477 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 NHLH1Q02575 133 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 LY6DQ14210 128 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 VMA21Q3ZAQ7 101 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 CCDC168Q8NDH2 2452 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 MMP23AO75900 390 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 PRCDQ00LT1 54 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 CD69Q07108 199 aa10.94□□□□□ -0.66
SCAF4-201ENST00000286835 A0A1W2PRE2 83 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 MPV17L2Q567V2 206 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 MORN5Q5VZ52 161 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 GAL3ST2Q9H3Q3 398 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 DYSFO75923 2080 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 TMEM11P17152 192 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 SLC25A34Q6PIV7 304 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 KIR3DL3Q8N743 410 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms