RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 KLF5Q13887 457 aaPredicted RBP8.47□□□□□ -1.05
SKA1-201ENST00000285116 EDDM3AQ14507 147 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 C2orf83Q53S99 150 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 COMMD5Q9GZQ3 224 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 FAM234AQ9H0X4 552 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 TECRQ9NZ01 308 aaKnown RBP8.47□□□□□ -1.05
SKA1-201ENST00000285116 A0A1W2PRE2 83 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 AHRRA9YTQ3 701 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 TOX4O94842 621 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 FABP6P51161 128 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 CT45A1Q5HYN5 189 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 VWA1Q6PCB0 445 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 C1orf229Q6ZS94 237 aaPredicted RBP8.46□□□□□ -1.06
SKA1-201ENST00000285116 SPACA3Q8IXA5 215 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 OR1L8Q8NGR8 309 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 CT45A3Q8NHU0 189 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 SCNM1Q9BWG6 230 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
SKA1-201ENST00000285116 SAP30LQ9HAJ7 183 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 ST20Q9HBF5 79 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 ENY2Q9NPA8 101 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 SERTAD4Q9NUC0 356 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 ZNF462Q96JM2 2506 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 CUBNO60494 3623 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 C2orf70A6NJV1 201 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 K7EM74 188 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 TAX1BP3O14907 124 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 SAA2P0DJI9 122 aaPredicted RBP8.46□□□□□ -1.06
SKA1-201ENST00000285116 HOXA4Q00056 320 aaPredicted RBP8.46□□□□□ -1.06
SKA1-201ENST00000285116 PSG5Q15238 335 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 BHLHA15Q7RTS1 189 aaPredicted RBP8.46□□□□□ -1.06
SKA1-201ENST00000285116 RNF24Q9Y225 148 aa8.46□□□□□ -1.06
SKA1-201ENST00000285116 PTPN13Q12923 2485 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 IGLV3-9A0A075B6K5 115 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 UPK2O00526 184 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 KLK10O43240 276 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 IGLV2-8P01709 118 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 PPOXP50336 477 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 MIR17HGQ75NE6 70 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 VKORC1L1Q8N0U8 176 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 OR2Z1Q8NG97 314 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 SH3BGRL2Q9UJC5 107 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 USP24Q9UPU5 2620 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
SKA1-201ENST00000285116 TAS2R45P59539 299 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 MPV17L2Q567V2 206 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 CNEP1R1Q8N9A8 125 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 IGF2BP2-AS1Q96M15 143 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 OR51B2Q9Y5P1 312 aa8.45□□□□□ -1.06
SKA1-201ENST00000285116 MBD3L4A6NDZ8 208 aaPredicted RBP8.44□□□□□ -1.06
SKA1-201ENST00000285116 MBD3L3A6NE82 208 aaPredicted RBP8.44□□□□□ -1.06
SKA1-201ENST00000285116 MBD3L5A6NJ08 208 aaPredicted RBP8.44□□□□□ -1.06
SKA1-201ENST00000285116 PSG1P11464 419 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 IGFBP2P18065 325 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 DEFB109BQ30KR1 87 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 DEFB125Q8N687 156 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 MBD3L2Q8NHZ7 208 aaPredicted RBP8.44□□□□□ -1.06
SKA1-201ENST00000285116 CACNG8Q8WXS5 425 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 NABP2Q9BQ15 211 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 TMEM70Q9BUB7 260 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 TNFRSF19Q9NS68 423 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 J3QR06 171 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 GLRXP35754 106 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
SKA1-201ENST00000285116 ZNF596Q8TC21 504 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 ZNF714Q96N38 554 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 C1RLQ9NZP8 487 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 PROCRQ9UNN8 238 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 WASHC3Q9Y3C0 194 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 CELSR1Q9NYQ6 3014 aa8.44□□□□□ -1.06
SKA1-201ENST00000285116 TRAV17A0A0B4J275 112 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 PSMB11A5LHX3 300 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 K7ERU9 68 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 OR2J3O76001 311 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 MSMPQ1L6U9 139 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 FAM162BQ5T6X4 162 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 C12orf54Q6X4T0 127 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 SLC25A48Q6ZT89 311 aaKnown RBP8.43□□□□□ -1.06
SKA1-201ENST00000285116 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 OR2V2Q96R30 315 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 PLEKHA3Q9HB20 300 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 CRXO43186 299 aaPredicted RBP8.43□□□□□ -1.06
SKA1-201ENST00000285116 ACTL6BO94805 426 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 LTC4SQ16873 150 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 TIMM23BQ5SRD1 257 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 PRR27Q6MZM9 219 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 GCM1Q9NP62 436 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 FZR1Q9UM11 496 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 OR4C46A6NHA9 309 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 NUDT3O95989 172 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 REG1BP48304 166 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 MFAP2P55001 183 aa8.43□□□□□ -1.06
SKA1-201ENST00000285116 RAI1Q7Z5J4 1906 aaPredicted RBP8.42□□□□□ -1.06
SKA1-201ENST00000285116 CA1P00915 261 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms