RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 C1QL4Q86Z23 238 aa6.25□□□□□ -1.41
EPHA4-201ENST00000281821 MRPL27Q9P0M9 148 aaKnown RBP6.25□□□□□ -1.41
EPHA4-201ENST00000281821 B4DEV8 164 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 TMEM250H0YL14 139 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 SHISA2Q6UWI4 295 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 LHFPL4Q7Z7J7 247 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 USP9YO00507 2555 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-201ENST00000281821 FCGR2BP31994 310 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-201ENST00000281821 CLEC19AQ6UXS0 136 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 VKORC1L1Q8N0U8 176 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 KLHDC1Q8N7A1 406 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 UBE2E2Q96LR5 201 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-201ENST00000281821 A6NDX4 124 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 FABP4P15090 132 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 CXCL3P19876 107 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 PAX6P26367 422 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 PDE6HQ13956 83 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 OR11H7Q8NGC8 314 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 RPH3ALQ9UNE2 315 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 NCOA6Q14686 2063 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-201ENST00000281821 ZNF292O60281 2723 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 DBX1A6NMT0 343 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 HOXA3O43365 443 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-201ENST00000281821 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 HILS1P60008 231 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 RUSC1-AS1Q66K80 236 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 BTCP35070 178 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 GNG4P50150 75 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 Q6YL49 198 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 ST6GALNAC6Q969X2 333 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 TVP23CQ96ET8 276 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 PRO1933Q9H354 126 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 TUBA4BQ9H853 241 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 ADAMTS20P59510 1910 aa6.24□□□□□ -1.41
EPHA4-201ENST00000281821 TOMM40O96008 361 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 LGALS1P09382 135 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 MGST1P10620 155 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 ZFP36P26651 326 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 SUPT4H1P63272 117 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 Q8N7P7 452 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 NPCDR1Q9BY65 106 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 CBY3A6NI87 242 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 RAMP3O60896 148 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 ORM1P02763 201 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 HSPB1P04792 205 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 IL6RP08887 468 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 RNASE2P10153 161 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 IER3P46695 156 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 RNF144BQ7Z419 303 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 OR1N2Q8NGR9 330 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 ATP6V0E1O15342 81 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 TFF1P04155 84 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 KLHL30-AS1Q8NEE0 82 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 ZNF48Q96MX3 618 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 SLC35B3Q9H1N7 401 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 TRAV25A0A0B4J276 109 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 NDUFA7O95182 113 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 ZNF343Q6P1L6 599 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 SSX7Q7RTT5 188 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 TMEM219Q86XT9 240 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 FAM24BQ8N5W8 94 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 OR2K2Q8NGT1 345 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 RNASE1P07998 156 aaKnown RBP6.23□□□□□ -1.41
EPHA4-201ENST00000281821 CD33P20138 364 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 CBLN2Q8IUK8 224 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 ZNF738Q8NE65 137 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 DOK5Q9P104 306 aa6.23□□□□□ -1.41
EPHA4-201ENST00000281821 TMEM218A2RU14 115 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 SYT8Q8NBV8 401 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 TMEM116Q8NCL8 245 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 A0A0B4J293 547 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 LEPP41159 167 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 KCNS1Q96KK3 526 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 DSCAMO60469 2012 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 C11orf94C9JXX5 98 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 BCL2P10415 239 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 TMEM241Q24JQ0 296 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 MIC13Q5XKP0 118 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 USP9XQ93008 2570 aaPredicted RBP6.22□□□□□ -1.41
EPHA4-201ENST00000281821 H2BFSP57053 126 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 OR5I1Q13606 314 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 OR5AC2Q9NZP5 309 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 CPAMD8Q8IZJ3 1885 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 FAM181BA6NEQ2 426 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 NBEAP1P0C6P0 100 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 ARL6IP6Q8N6S5 226 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 C1orf159Q96HA4 380 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 OTORQ9NRC9 128 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 MYO9AB2RTY4 2548 aa6.22□□□□□ -1.41
EPHA4-201ENST00000281821 FAM74A7A6NL05 159 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 GATCO43716 136 aaKnown RBP6.21□□□□□ -1.41
EPHA4-201ENST00000281821 IGHV4-59P01825 116 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 IGKV1-16P04430 117 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 IGF1P05019 195 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 TAS2R60P59551 318 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 NHLH2Q02577 135 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 COTL1Q14019 142 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms