RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 A0A1W2PPI3 338 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 TCAPO15273 167 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 CXCL1P09341 107 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 RNASE2P10153 161 aaKnown RBP7.28□□□□□ -1.24
SEC16A-201ENST00000277537 CDX1P47902 265 aaPredicted RBP7.28□□□□□ -1.24
SEC16A-201ENST00000277537 TMEM177Q53S58 311 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 RITA1Q96K30 269 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 SDF2L1Q9HCN8 221 aa7.28□□□□□ -1.24
SEC16A-201ENST00000277537 ZNF785A8K8V0 405 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 FCN1O00602 326 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 UBE2CO00762 179 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 DDTP30046 118 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 KHDC1LQ5JSQ8 128 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 RNF2Q99496 336 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 ZNF331Q9NQX6 463 aaPredicted RBP7.27□□□□□ -1.25
SEC16A-201ENST00000277537 SIGLEC9Q9Y336 463 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 CORTO00230 105 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 IL4P05112 153 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 CSN1S1P47710 185 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 MRPL54Q6P161 138 aaKnown RBP7.27□□□□□ -1.25
SEC16A-201ENST00000277537 BRD3OSQ6XYD6 125 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 KDF1Q8NAX2 398 aaPredicted RBP7.27□□□□□ -1.25
SEC16A-201ENST00000277537 ZNF439Q8NDP4 499 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 CACNG8Q8WXS5 425 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 TRAV1-1A0A0B4J248 108 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 K7EQM0 130 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 CGB3P0DN86 165 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 CGB7P0DN87 165 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 CD81P60033 236 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 WT1-ASQ06250 92 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 OR5I1Q13606 314 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 C2orf83Q53S99 150 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 TPTE2P1Q5T6R2 138 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 TEX45Q8NA69 505 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 C11orf1Q9H5F2 150 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 C7orf69Q9H7B7 122 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 KAAG1Q9UBP8 84 aa7.27□□□□□ -1.25
SEC16A-201ENST00000277537 IGHV3-49A0A0A0MS15 119 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 SLC17A3O00476 420 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 CAMPP49913 170 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
SEC16A-201ENST00000277537 TMEM219Q86XT9 240 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 TNFRSF14Q92956 283 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 CTDSP1Q9GZU7 261 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 ATMQ13315 3056 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 RNASEH2CQ8TDP1 164 aaKnown RBP7.26□□□□□ -1.25
SEC16A-201ENST00000277537 DDB2Q92466 427 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 SIAH2O43255 324 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BKO60814 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 IGHV2-70P01814 119 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BJP06899 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BOP23527 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BBP33778 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 GPX4P36969 197 aaPredicted RBP7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BDP58876 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BCP62807 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST2H2BEQ16778 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.26□□□□□ -1.25
SEC16A-201ENST00000277537 OR4A5Q8NH83 315 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BHQ93079 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 ANAPC16Q96DE5 110 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BNQ99877 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H2BMQ99879 126 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 DMRT1Q9Y5R6 373 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 C2CD3Q4AC94 2353 aa7.26□□□□□ -1.25
SEC16A-201ENST00000277537 TRAV40A0A0B4J280 105 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 GATCO43716 136 aaKnown RBP7.25□□□□□ -1.25
SEC16A-201ENST00000277537 STAG3L2P0CL84 134 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 STAG3L3P0CL85 134 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 CT45A10P0DMU9 189 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 ZNF25P17030 456 aaPredicted RBP7.25□□□□□ -1.25
SEC16A-201ENST00000277537 ATP5IP56385 69 aaPredicted RBP7.25□□□□□ -1.25
SEC16A-201ENST00000277537 ARPC1AQ92747 370 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 ELOVL1Q9BW60 279 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 AAMDCQ9H7C9 122 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 NDUFA4L2Q9NRX3 87 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 AGAP20933 346 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 CENPWQ5EE01 88 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 MAPK1IP1LQ8NDC0 245 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 A6NNC1 897 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 E7EUB6 86 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 CD33P20138 364 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 HOXA5P20719 270 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 PRTN3P24158 256 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 IER3P46695 156 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 CR1LQ2VPA4 569 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 FAM90A2PQ658T7 463 aa7.25□□□□□ -1.25
SEC16A-201ENST00000277537 IGHV3-66A0A0C4DH42 116 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 MFAP4P55083 255 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 TOMM20LQ6UXN7 152 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 STXBP6Q8NFX7 210 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 TCRBV4S1A1TA0A5B7 111 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
SEC16A-201ENST00000277537 VENTXO95231 258 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 NBEAP1P0C6P0 100 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 HIST1H1BP16401 226 aaKnown RBP7.24□□□□□ -1.25
SEC16A-201ENST00000277537 PAX5Q02548 391 aa7.24□□□□□ -1.25
SEC16A-201ENST00000277537 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms