RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 S1PR3Q99500 378 aa10.5□□□□□ -0.73
HERC6-202ENST00000273960 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
HERC6-202ENST00000273960 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
HERC6-202ENST00000273960 PROP1O75360 226 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 B3GALT5-AS1P59052 145 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 OR2K2Q8NGT1 345 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 COL6A6A6NMZ7 2263 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 IGHV3OR15-7A0A075B7D8 119 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 TRBV6-6A0A0A6YYG2 114 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 MDP1Q86V88 176 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 TMEM167BQ9NRX6 74 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 ZNRD1Q9P1U0 126 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 IGKV1OR2-108A0A075B7D4 117 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 PPIAL4CA0A0B4J2A2 164 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 PPIAL4GP0DN37 164 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 GUSBP1Q15486 140 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 RTL8BQ17RB0 113 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 ZNF788Q6ZQV5 615 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 C11orf52Q96A22 123 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 OR2V2Q96R30 315 aa10.49□□□□□ -0.73
HERC6-202ENST00000273960 CACNA1BQ00975 2339 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 DKK1O94907 266 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 KIR3DS1Q14943 382 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 KRTAP27-1Q3LI81 207 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 MPC1Q9Y5U8 109 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 TEX48A0A1B0GUV7 120 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 A0A1W2PRD5 423 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 A0A1W2PRF3 423 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 A0A1W2PRM7 423 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
HERC6-202ENST00000273960 OR10W1Q8NGF6 305 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 FLYWCH2Q96CP2 140 aaKnown RBP10.48□□□□□ -0.73
HERC6-202ENST00000273960 NCOR1P1Q9H4R4 102 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 OOEPA6NGQ2 149 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 G3V4G9 280 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 HLA-DRB1P01911 266 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 SLC25A5P05141 298 aaKnown RBP10.48□□□□□ -0.73
HERC6-202ENST00000273960 DUTP33316 252 aaKnown RBP10.48□□□□□ -0.73
HERC6-202ENST00000273960 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
HERC6-202ENST00000273960 SLC25A40Q8TBP6 338 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 TTTY13Q9BZ97 58 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
HERC6-202ENST00000273960 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
HERC6-202ENST00000273960 LGALS7P47929 136 aa10.47□□□□□ -0.73
HERC6-202ENST00000273960 SSBP2P81877 361 aaPredicted RBP10.47□□□□□ -0.73
HERC6-202ENST00000273960 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
HERC6-202ENST00000273960 RABAC1Q9UI14 185 aa10.47□□□□□ -0.73
HERC6-202ENST00000273960 NKX2-8O15522 239 aa10.47□□□□□ -0.73
HERC6-202ENST00000273960 RND1Q92730 232 aa10.47□□□□□ -0.73
HERC6-202ENST00000273960 NCKAP5O14513 1909 aa10.47□□□□□ -0.73
HERC6-202ENST00000273960 TRAV8-1A0A0A6YYK1 113 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 NPIPB11E5RHQ5 1161 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 K7ERJ3 54 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 ORM2P19652 201 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 MEOX1P50221 254 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 FAM120AOSQ5T036 256 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 VWA1Q6PCB0 445 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 REG1AP05451 166 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 ACP1P24666 158 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 COX19Q49B96 90 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 TMEM177Q53S58 311 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 LINC00322Q6ZN03 302 aaPredicted RBP10.46□□□□□ -0.73
HERC6-202ENST00000273960 LINC00596Q86U02 117 aa10.46□□□□□ -0.73
HERC6-202ENST00000273960 ZGRF1Q86YA3 2104 aa10.46□□□□□ -0.74
HERC6-202ENST00000273960 CD59P13987 128 aa10.46□□□□□ -0.74
HERC6-202ENST00000273960 GCSHP23434 173 aa10.46□□□□□ -0.74
HERC6-202ENST00000273960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 FAM106CPP0CH98 169 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 ZNF134P52741 427 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 FAM106AQ4KMX7 169 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 C1orf229Q6ZS94 237 aaPredicted RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 TTTY12Q9BZ98 90 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 DSCAML1Q8TD84 2053 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 AKAP6Q13023 2319 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 CDX4O14627 284 aaPredicted RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 LYZL6O75951 148 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 AGFG2O95081 481 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 APOHP02749 345 aaPredicted RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 HBBP68871 147 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 RBPJQ06330 500 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 ZNRF1Q8ND25 227 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 PRSS3P2Q8NHM4 247 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 FAM173AQ9BQD7 235 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 TSSC4Q9Y5U2 329 aaPredicted RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 A0A1W2PNU3 283 aaPredicted RBP10.45□□□□□ -0.74
HERC6-202ENST00000273960 C21orf140B9A014 251 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 COX7A2P2O60397 106 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 MPV17P39210 176 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 TAS2R45P59539 299 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 ZBTB34Q8NCN2 500 aa10.45□□□□□ -0.74
HERC6-202ENST00000273960 GRAMD2BQ96HH9 432 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms