RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 Q6ZS52 159 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 TCF19Q9Y242 345 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 A0A1W2PQF6 199 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 IFITM3Q01628 133 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 ZXDCQ2QGD7 858 aaPredicted RBP13.33□□□□□ -0.28
UBR3-201ENST00000272793 SPXQ9BT56 116 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 CCL3P10147 92 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 GNG5P63218 68 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 RASL11AQ6T310 242 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 IFNL4K9M1U5 179 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 PRIMA1Q86XR5 153 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 CNOT1A5YKK6 2376 aaKnown RBP13.32□□□□□ -0.28
UBR3-201ENST00000272793 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
UBR3-201ENST00000272793 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 IGHV1-69-2A0A0G2JMI3 117 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 ID3Q02535 119 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 TCF15Q12870 199 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 BOD1L2Q8IYS8 172 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 BRK1Q8WUW1 75 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 SPEM1Q8N4L4 309 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 OR13A1Q8NGR1 328 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 RNF115Q9Y4L5 304 aa13.32□□□□□ -0.28
UBR3-201ENST00000272793 NANOS3P60323 173 aaKnown RBP13.31□□□□□ -0.28
UBR3-201ENST00000272793 C1orf159Q96HA4 380 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 GNB1LQ9BYB4 327 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 LINC01565O15544 149 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 KIAA0040Q15053 153 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 FAM90A10PA6NDY2 464 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 FAM90A13PP0C7W8 464 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 FAM90A24PP0C7X0 464 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 LDLRAD1Q5T700 205 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 PQLC2LA1A4F0 135 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 ACTL10Q5JWF8 245 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 TAF1LQ8IZX4 1826 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 TRGV11A0A075B6L2 103 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
UBR3-201ENST00000272793 TFF3Q07654 80 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 UBR3Q6ZT12 1888 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 COL9A1P20849 921 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 C1orf53Q5VUE5 145 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 OSR1Q8TAX0 266 aaPredicted RBP13.3□□□□□ -0.28
UBR3-201ENST00000272793 LOC102723996A0A087X1L8 192 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 SPTY2D1-AS1A0A0U1RR47 76 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 F2Z2F3 143 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 IGHG2P01859 326 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 SAXO1Q8IYX7 474 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 COLCA1Q6ZS62 124 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 IFI27L2Q9H2X8 130 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 TRAV14DV4A0A0A6YYC5 116 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 OR9G1Q8NH87 305 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 SMIM2Q9BVW6 85 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 OTOGLQ3ZCN5 2332 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 Q5BKY6 102 aa13.3□□□□□ -0.28
UBR3-201ENST00000272793 TMEM170AQ8WVE7 144 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 SS18L2Q9UHA2 77 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 ATG2AQ2TAZ0 1938 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 PEX11BO96011 259 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 H2BFSP57053 126 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 ZNF876PQ49A33 203 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 FAM168AQ92567 244 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 SBF2Q86WG5 1849 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 FAM60AQ9NP50 221 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 C21orf140B9A014 251 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 F8VVB4 439 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 F8VWA3 439 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 KIR3DS1Q14943 382 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 IMMP1LQ96LU5 166 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 RPL39P5Q59GN2 51 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 R3HDMLQ9H3Y0 253 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 MSGN1A6NI15 193 aa13.29□□□□□ -0.28
UBR3-201ENST00000272793 LIFP15018 202 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 TEX22C9J3V5 150 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 PTGDSP41222 190 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 GUSBP1Q15486 140 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 ATP5G3P48201 142 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 PRSS23O95084 383 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 C8orf46Q8TAG6 207 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 MYMXA0A1B0GTQ4 84 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
UBR3-201ENST00000272793 DUSP14O95147 198 aaKnown RBP13.28□□□□□ -0.28
UBR3-201ENST00000272793 A0A0A6YYD4 124 aa13.27□□□□□ -0.28
UBR3-201ENST00000272793 hDV102S1A0JD36 115 aa13.27□□□□□ -0.28
UBR3-201ENST00000272793 TICRRQ7Z2Z1 1910 aa13.27□□□□□ -0.28
UBR3-201ENST00000272793 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.28
UBR3-201ENST00000272793 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.28
UBR3-201ENST00000272793 SPATA25Q9BR10 227 aa13.27□□□□□ -0.29
UBR3-201ENST00000272793 TIMM21Q9BVV7 248 aa13.27□□□□□ -0.29
UBR3-201ENST00000272793 ZNF703Q9H7S9 590 aaPredicted RBP13.27□□□□□ -0.29
UBR3-201ENST00000272793 USF3Q68DE3 2245 aa13.27□□□□□ -0.29
UBR3-201ENST00000272793 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms