RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 PXMP4Q9Y6I8 212 aa19.31■□□□□ 0.68
SSBP4-201ENST00000270061 CRYGCP07315 174 aa19.3■□□□□ 0.68
SSBP4-201ENST00000270061 MFAP2P55001 183 aa19.3■□□□□ 0.68
SSBP4-201ENST00000270061 GUK1Q16774 197 aa19.3■□□□□ 0.68
SSBP4-201ENST00000270061 CTXND1A0A1B0GTU2 59 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 M0QZ24 198 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 CYB5BO43169 146 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 CX3CL1P78423 397 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 ACTR3CQ9C0K3 210 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-201ENST00000270061 SMDT1Q9H4I9 107 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 ZNF702PQ9H963 129 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 TREM1Q9NP99 234 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 SLC39A9Q9NUM3 307 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 SEC14L6B5MCN3 397 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 YIF1AO95070 293 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 HLA-DRB1P01911 266 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 CTRB1P17538 263 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PRR20EP86478 221 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PRR20CP86479 221 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PRR20DP86480 221 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PRR20BP86481 221 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PRR20AP86496 221 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PEA15Q15121 130 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 CTRB2Q6GPI1 263 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 SSX7Q7RTT5 188 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 OR1L6Q8NGR2 347 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 PRSS22Q9GZN4 317 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 SLC45A2Q9UMX9 530 aa19.29■□□□□ 0.68
SSBP4-201ENST00000270061 IGKV1OR2-108A0A075B7D4 117 aa19.28■□□□□ 0.68
SSBP4-201ENST00000270061 PMS2P11Q13670 270 aa19.28■□□□□ 0.68
SSBP4-201ENST00000270061 MIC13Q5XKP0 118 aa19.28■□□□□ 0.68
SSBP4-201ENST00000270061 ABHD5Q8WTS1 349 aa19.28■□□□□ 0.68
SSBP4-201ENST00000270061 B2MP61769 119 aa19.27■□□□□ 0.68
SSBP4-201ENST00000270061 Q8N2B8 174 aa19.27■□□□□ 0.68
SSBP4-201ENST00000270061 ARPC1AQ92747 370 aa19.27■□□□□ 0.68
SSBP4-201ENST00000270061 NARS2Q96I59 477 aaKnown RBP19.27■□□□□ 0.68
SSBP4-201ENST00000270061 TMEM231Q9H6L2 316 aa19.27■□□□□ 0.68
SSBP4-201ENST00000270061 A0A1B0GV50 99 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 MAP1LC3B2A6NCE7 125 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 APELAP0DMC3 54 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 LCN15Q6UWW0 184 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 C16orf82Q7Z2V1 217 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 KLHDC1Q8N7A1 406 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 STPG3Q8N7X2 389 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 THAP8Q8NA92 274 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 RASL11BQ9BPW5 248 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 MAP1LC3BQ9GZQ8 125 aa19.27■□□□□ 0.67
SSBP4-201ENST00000270061 LINC00869P0C866 280 aa19.26■□□□□ 0.67
SSBP4-201ENST00000270061 BLCAPP62952 87 aa19.26■□□□□ 0.67
SSBP4-201ENST00000270061 C10orf91Q5T1B1 145 aa19.26■□□□□ 0.67
SSBP4-201ENST00000270061 MISP3Q96FF7 219 aa19.26■□□□□ 0.67
SSBP4-201ENST00000270061 WNT10AQ9GZT5 417 aa19.26■□□□□ 0.67
SSBP4-201ENST00000270061 EIF5A2Q9GZV4 153 aaKnown RBP19.26■□□□□ 0.67
SSBP4-201ENST00000270061 IGHV7-81A0A0B4J1V7 117 aa19.25■□□□□ 0.67
SSBP4-201ENST00000270061 RBFOX3A6NFN3 312 aa19.25■□□□□ 0.67
SSBP4-201ENST00000270061 NPIPB5A8MRT5 1133 aa19.25■□□□□ 0.67
SSBP4-201ENST00000270061 FAM122CQ6P4D5 195 aa19.25■□□□□ 0.67
SSBP4-201ENST00000270061 RAB24Q969Q5 203 aa19.25■□□□□ 0.67
SSBP4-201ENST00000270061 DMRT1Q9Y5R6 373 aa19.25■□□□□ 0.67
SSBP4-201ENST00000270061 OR10J1P30954 320 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 CDC34P49427 236 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-201ENST00000270061 NDPQ00604 133 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 TTC9CQ8N5M4 171 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 TMEM116Q8NCL8 245 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 ACY3Q96HD9 319 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 RBM14Q96PK6 669 aaKnown RBP19.24■□□□□ 0.67
SSBP4-201ENST00000270061 SLC25A33Q9BSK2 321 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 SERTAD4Q9NUC0 356 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 C9JQL5 133 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 NPIPB3Q92617 1050 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 SLC25A22Q9H936 323 aa19.24■□□□□ 0.67
SSBP4-201ENST00000270061 GCSAMLQ5JQS6 135 aa19.23■□□□□ 0.67
SSBP4-201ENST00000270061 ASPHD1Q5U4P2 390 aa19.23■□□□□ 0.67
SSBP4-201ENST00000270061 C19orf35Q6ZS72 473 aa19.23■□□□□ 0.67
SSBP4-201ENST00000270061 FAM103A1Q9BTL3 118 aaKnown RBP19.23■□□□□ 0.67
SSBP4-201ENST00000270061 SEC11CQ9BY50 192 aa19.23■□□□□ 0.67
SSBP4-201ENST00000270061 EGR2P11161 476 aaPredicted RBP19.22■□□□□ 0.67
SSBP4-201ENST00000270061 ZNF506Q5JVG8 444 aa19.22■□□□□ 0.67
SSBP4-201ENST00000270061 Q6ZS46 218 aa19.22■□□□□ 0.67
SSBP4-201ENST00000270061 CCDC28AQ8IWP9 274 aa19.22■□□□□ 0.67
SSBP4-201ENST00000270061 MRPL36Q9P0J6 103 aaKnown RBP19.22■□□□□ 0.67
SSBP4-201ENST00000270061 I3L2K1 104 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 MT-CO2P00403 227 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 DEFA4P12838 97 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 FGF8P55075 233 aaPredicted RBP19.21■□□□□ 0.67
SSBP4-201ENST00000270061 CYP2G1PQ6ZSU1 146 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 C5orf56Q8N8D9 126 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 C11orf44Q8N8P7 122 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 CARHSP1Q9Y2V2 147 aaKnown RBP19.21■□□□□ 0.67
SSBP4-201ENST00000270061 MOB4Q9Y3A3 225 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 IGKV1D-37A0A075B6S9 117 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 A0A1W2PPV4 95 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 ADCYAP1P18509 176 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 RND2P52198 227 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 KHDC3LQ587J8 217 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 RARRES2Q99969 163 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 NOTCH1P46531 2555 aa19.21■□□□□ 0.67
SSBP4-201ENST00000270061 MEGF8Q7Z7M0 2845 aa19.2■□□□□ 0.66
SSBP4-201ENST00000270061 TCRBV4S1A1TA0A5B7 111 aa19.2■□□□□ 0.66
SSBP4-201ENST00000270061 F8W036 122 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms