RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LY6EQ16553 131 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 F8W036 122 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 UNQ5815/PRO19632Q6UWF5 114 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 SLC35E3Q7Z769 313 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 TMEM37Q8WXS4 190 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 ZNF48Q96MX3 618 aaPredicted RBP12.85□□□□□ -0.35
TPM1-201ENST00000267996 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 CSMD1Q96PZ7 3565 aa12.85□□□□□ -0.35
TPM1-201ENST00000267996 CLN5O75503 358 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 IFNA1P01562 189 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 APOC3P02656 99 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
TPM1-201ENST00000267996 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
TPM1-201ENST00000267996 PSMB3P49720 205 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 PPT1P50897 306 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 RBMS3Q6XE24 437 aaKnown RBP12.84□□□□□ -0.35
TPM1-201ENST00000267996 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 THYN1Q9P016 225 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 FUT9Q9Y231 359 aa12.84□□□□□ -0.35
TPM1-201ENST00000267996 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.35
TPM1-201ENST00000267996 NDUFB8O95169 186 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 CXorf1O96002 111 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.35
TPM1-201ENST00000267996 FAM78BQ5VT40 261 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 RXFP4Q8TDU9 374 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 RNF2Q99496 336 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 PRDM13Q9H4Q3 707 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 DNAJC4Q9NNZ3 241 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 MANBALQ9NQG1 85 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 VAX2Q9UIW0 290 aa12.83□□□□□ -0.35
TPM1-201ENST00000267996 TRBV9A0A0B4J1U6 114 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 IGHG2P01859 326 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 IGF1P05019 195 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 ARL14EPLP0DKL9 152 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 IER3P46695 156 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 PLP1P60201 277 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 ECSCRQ19T08 205 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 PATE2Q6UY27 113 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 OR1L4Q8NGR5 311 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 PFDN5Q99471 154 aa12.83□□□□□ -0.36
TPM1-201ENST00000267996 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
TPM1-201ENST00000267996 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
TPM1-201ENST00000267996 TEX15Q9BXT5 2789 aa12.82□□□□□ -0.36
TPM1-201ENST00000267996 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
TPM1-201ENST00000267996 G3V318 75 aa12.82□□□□□ -0.36
TPM1-201ENST00000267996 MFAP4P55083 255 aa12.82□□□□□ -0.36
TPM1-201ENST00000267996 SPNS3Q6ZMD2 512 aa12.82□□□□□ -0.36
TPM1-201ENST00000267996 OR5R1Q8NH85 324 aa12.82□□□□□ -0.36
TPM1-201ENST00000267996 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
TPM1-201ENST00000267996 OR2J3O76001 311 aa12.81□□□□□ -0.36
TPM1-201ENST00000267996 FCGR2BP31994 310 aaPredicted RBP12.81□□□□□ -0.36
TPM1-201ENST00000267996 NPBWR1P48145 328 aa12.81□□□□□ -0.36
TPM1-201ENST00000267996 GUCA2BQ16661 112 aa12.81□□□□□ -0.36
TPM1-201ENST00000267996 TIGITQ495A1 244 aa12.81□□□□□ -0.36
TPM1-201ENST00000267996 Q6YL49 198 aa12.81□□□□□ -0.36
TPM1-201ENST00000267996 TECRQ9NZ01 308 aaKnown RBP12.81□□□□□ -0.36
TPM1-201ENST00000267996 HECTD1Q9ULT8 2610 aa12.81□□□□□ -0.36
TPM1-201ENST00000267996 ZNF469Q96JG9 3925 aaPredicted RBP12.81□□□□□ -0.36
TPM1-201ENST00000267996 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 ELOA3CA0A087WX78 387 aaPredicted RBP12.8□□□□□ -0.36
TPM1-201ENST00000267996 TRAV41A0A0B4J266 112 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 GCHFRP30047 84 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 SVBPQ8N300 66 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 TEX29Q8N6K0 151 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 FAM167A-AS1Q96KT0 104 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 SMAD7O15105 426 aaKnown RBP12.8□□□□□ -0.36
TPM1-201ENST00000267996 BRI3O95415 125 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 FABP1P07148 127 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 C8orf88P0DMB2 117 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 PSG1P11464 419 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 CD81P60033 236 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 BLCAPP62952 87 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 DEFA5Q01523 94 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
TPM1-201ENST00000267996 KRTAP1-1Q07627 177 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 C10orf113Q5VZT2 155 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 TXN2Q99757 166 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 ZNF580Q9UK33 172 aa12.8□□□□□ -0.36
TPM1-201ENST00000267996 FLNAP21333 2647 aaKnown RBP12.79□□□□□ -0.36
TPM1-201ENST00000267996 PAGE4O60829 102 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 TAS2R45P59539 299 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
TPM1-201ENST00000267996 RHOGP84095 191 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 SOHLH1Q5JUK2 328 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 ATRAIDQ6UW56 229 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 PQLC2Q6ZP29 291 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms