RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ENY2Q9NPA8 101 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 SMCO4Q9NRQ5 59 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 HSPB7Q9UBY9 170 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 NBEAL1Q6ZS30 2694 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 IGHV4OR15-8A0A075B7B6 117 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 A0A087WW49 117 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 CCL24O00175 119 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 AGPAT2O15120 278 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 BRI3O95415 125 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 CAMLGP49069 296 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 OR11H1Q8NG94 326 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 OR52E5Q8NH55 327 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 PIGBOS1A0A0B4J2F0 54 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 FAM223BA6NKX1 122 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 ERHP84090 104 aaKnown RBP14.16□□□□□ -0.14
SDF4-201ENST00000263741 ATP5G2Q06055 141 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 PRR31Q5SQ13 230 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 FAM223AQ8IWN6 122 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 MISP3Q96FF7 219 aa14.16□□□□□ -0.14
SDF4-201ENST00000263741 HEYLQ9NQ87 328 aaPredicted RBP14.16□□□□□ -0.14
SDF4-201ENST00000263741 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
SDF4-201ENST00000263741 ZNF616Q08AN1 781 aa14.15□□□□□ -0.14
SDF4-201ENST00000263741 MRPL41Q8IXM3 137 aaKnown RBP14.15□□□□□ -0.14
SDF4-201ENST00000263741 PBDC1Q9BVG4 233 aa14.15□□□□□ -0.14
SDF4-201ENST00000263741 A0A0G2JLM5 398 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 RNASE2P10153 161 aaKnown RBP14.14□□□□□ -0.15
SDF4-201ENST00000263741 IAPPP10997 89 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 PDLIM3Q53GG5 364 aaPredicted RBP14.14□□□□□ -0.15
SDF4-201ENST00000263741 C15orf54Q8N8G6 183 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 PINX1Q96BK5 328 aaKnown RBP14.14□□□□□ -0.15
SDF4-201ENST00000263741 USMG5Q96IX5 58 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 RCL1Q9Y2P8 373 aaKnown RBP14.14□□□□□ -0.15
SDF4-201ENST00000263741 SPP1P10451 314 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 SLC25A6P12236 298 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 HIST1H1BP16401 226 aaKnown RBP14.14□□□□□ -0.15
SDF4-201ENST00000263741 SNCAP37840 140 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 SLURP1P55000 103 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 TREML4Q6UXN2 200 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 ZNF114Q8NC26 417 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 OR1N2Q8NGR9 330 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 OR1P1Q8NH06 330 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 CCDC140Q96MF4 163 aa14.14□□□□□ -0.15
SDF4-201ENST00000263741 PPP5D1E7EU14 171 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 PPT1P50897 306 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 AKR1D1P51857 326 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 RAB5BP61020 215 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 RUNX1Q01196 453 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 ZNF266Q14584 549 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 ZNF343Q6P1L6 599 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 DTD1Q8TEA8 209 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 GUK1Q16774 197 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 LINC00482Q8N8I6 264 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 OR4D5Q8NGN0 318 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 RXFP4Q8TDU9 374 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 TMEM170AQ8WVE7 144 aa14.13□□□□□ -0.15
SDF4-201ENST00000263741 NOTCH1P46531 2555 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 INS-IGF2F8WCM5 200 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 K7EIM0 57 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 FOLR2P14207 255 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 FHL3Q13643 280 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 KLK9Q2XQG4 91 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 SLC24A4Q8NFF2 622 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 DPF1Q92782 380 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 SLC25A31Q9H0C2 315 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 CACFD1Q9UGQ2 172 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 KLK9Q9UKQ9 250 aa14.12□□□□□ -0.15
SDF4-201ENST00000263741 IFNA4P05014 189 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 POLR2GP62487 172 aaKnown RBP eCLIP14.11□□□□□ -0.15
SDF4-201ENST00000263741 CLEC19AQ6UXS0 136 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 EIF5A2Q9GZV4 153 aaKnown RBP14.11□□□□□ -0.15
SDF4-201ENST00000263741 PLA2G2EQ9NZK7 142 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 MYCNOSP40205 109 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 BSXQ3C1V8 233 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 EEF1AKMT3Q96AZ1 226 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 HIPK2Q9H2X6 1198 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 THYN1Q9P016 225 aa14.11□□□□□ -0.15
SDF4-201ENST00000263741 PEF1Q9UBV8 284 aaKnown RBP14.11□□□□□ -0.15
SDF4-201ENST00000263741 LINC01619G3V211 115 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 H3BP45 60 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 WRBO00258 174 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 CYB5BO43169 146 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 MT-CO2P00403 227 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 GPR183P32249 361 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 NKX2-1P43699 371 aaPredicted RBP14.1□□□□□ -0.15
SDF4-201ENST00000263741 VAMP2P63027 116 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 EWSR1Q01844 656 aaKnown RBP eCLIP14.1□□□□□ -0.153e-8■■■■■ 28.8
SDF4-201ENST00000263741 WFDC1Q9HC57 220 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 I3L2K1 104 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 BMPR1BO00238 502 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 SYNGR2O43760 224 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 SSSCA1O60232 199 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 HSPB1P04792 205 aaKnown RBP14.1□□□□□ -0.15
SDF4-201ENST00000263741 NPY1RP25929 384 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
SDF4-201ENST00000263741 RPL35P42766 123 aaKnown RBP14.1□□□□□ -0.15
SDF4-201ENST00000263741 CTAG1AP78358 180 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 ZNF502Q8TBZ5 544 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 SMDT1Q9H4I9 107 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 RPS10P5Q9NQ39 176 aa14.1□□□□□ -0.15
SDF4-201ENST00000263741 ZMAT5Q9UDW3 170 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms