RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF331Q9NQX6 463 aaPredicted RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 RALYQ9UKM9 306 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 COL6A6A6NMZ7 2263 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 IGF2RP11717 2491 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 C9JCJ5 164 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 PAFAH1B2P68402 229 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 ERHP84090 104 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 Q56UQ5 140 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 GDF5OSQ5U4N7 250 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 TMEM200BQ69YZ2 307 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 ZNF788Q6ZQV5 615 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 SLC25A48Q6ZT89 311 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 TXNDC17Q9BRA2 123 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 PAXXQ9BUH6 204 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 ZNF430Q9H8G1 570 aaPredicted RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 hADV38S2A0JD32 116 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 APOA2P02652 100 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 TAS2R45P59539 299 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 CR1LQ2VPA4 569 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 C10orf113Q5VZT2 155 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 LINC00305Q7Z4B0 112 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 CORO2AQ92828 525 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 TXN2Q99757 166 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 MIEN1Q9BRT3 115 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 SFXN3Q9BWM7 321 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 C3orf79P0CE67 100 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 TNFSF4P23510 183 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
MSH4-201ENST00000263187 FAM167A-AS1Q96KT0 104 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 S4R3C0 116 aa7.38□□□□□ -1.23
MSH4-201ENST00000263187 TRAV8-1A0A0A6YYK1 113 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 MBD3L4A6NDZ8 208 aaPredicted RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 MBD3L3A6NE82 208 aaPredicted RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 MBD3L5A6NJ08 208 aaPredicted RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 H0YJW9 148 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 SLC25A5P05141 298 aaKnown RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 RPLP1P05386 114 aaKnown RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 TNXAQ16473 311 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 Q6ZN92 141 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 NUDT10Q8NFP7 164 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 MBD3L2Q8NHZ7 208 aaPredicted RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 TSKUQ8WUA8 353 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 NUDT11Q96G61 164 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 GNB1LQ9BYB4 327 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 CLEC5AQ9NY25 188 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 AMY1AP04745 511 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 PPOXP50336 477 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 ZNF841Q6ZN19 808 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 ADTRPQ96IZ2 230 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 ZNF714Q96N38 554 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 ZFHX3Q15911 3703 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 IGLV3-9A0A075B6K5 115 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 PGPA6NDG6 321 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 HIGD1CA8MV81 97 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 CFHR2P36980 270 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
MSH4-201ENST00000263187 ZNF138P52744 262 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 BSPH1Q075Z2 132 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 NUP35Q8NFH5 326 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 IGF2BP2-AS1Q96M15 143 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 ZNF835Q9Y2P0 537 aa7.37□□□□□ -1.23
MSH4-201ENST00000263187 ANKHD1Q8IWZ3 2542 aaKnown RBP7.36□□□□□ -1.23
MSH4-201ENST00000263187 CGB1A6NKQ9 187 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 KLK10O43240 276 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 C2orf83Q53S99 150 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 C1orf185Q5T7R7 199 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 Q8N976 141 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 BORCS7Q96B45 105 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 LPAR2Q9HBW0 351 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 NDUFA4L2Q9NRX3 87 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 CELSR1Q9NYQ6 3014 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 DPRXA6NFQ7 191 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 VWC2LB2RUY7 222 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 PEX7O00628 323 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 ZNF324O75467 553 aaPredicted RBP7.36□□□□□ -1.23
MSH4-201ENST00000263187 HSBP1O75506 76 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 UBE2G1P62253 170 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 LINC00322Q6ZN03 302 aaPredicted RBP7.36□□□□□ -1.23
MSH4-201ENST00000263187 NIT1Q86X76 327 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 CLEC7AQ9BXN2 247 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
MSH4-201ENST00000263187 A0A1W2PPI3 338 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 Q0VG73 95 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 DMRTA1Q5VZB9 504 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 IGFL2Q6UWQ7 119 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 PGLYRP4Q96LB8 373 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 TPPP3Q9BW30 176 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 SSUH2Q9Y2M2 353 aa7.35□□□□□ -1.23
MSH4-201ENST00000263187 NKX6-3A6NJ46 265 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms