RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RTL8BQ17RB0 113 aa18.32■□□□□ 0.52
MCF2L-201ENST00000261963 ZNF833PQ6ZTB9 187 aa18.32■□□□□ 0.52
MCF2L-201ENST00000261963 RND1Q92730 232 aa18.32■□□□□ 0.52
MCF2L-201ENST00000261963 JKAMPQ9P055 326 aa18.32■□□□□ 0.52
MCF2L-201ENST00000261963 CCL3L1P16619 93 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 IGFBP2P18065 325 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PQLC2Q6ZP29 291 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PKDREJQ9NTG1 2253 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 FOXH1O75593 365 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 RPS20P60866 119 aaKnown RBP18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PRR20EP86478 221 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PRR20CP86479 221 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PRR20DP86480 221 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PRR20BP86481 221 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PRR20AP86496 221 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 PLEKHA3Q9HB20 300 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 RNF24Q9Y225 148 aa18.31■□□□□ 0.52
MCF2L-201ENST00000261963 IGLL1P15814 213 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 RHOGP84095 191 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 LRRC10Q5BKY1 277 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 FAM122AQ96E09 287 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 MRPL20Q9BYC9 149 aaKnown RBP18.3■□□□□ 0.52
MCF2L-201ENST00000261963 TEX50A0A1B0GTY4 177 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 LINC00869P0C866 280 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 SAA1P0DJI8 122 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-201ENST00000261963 MEF2CQ06413 473 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-201ENST00000261963 TIGITQ495A1 244 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 Q56UQ5 140 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 MOB3BQ86TA1 216 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 C18orf32Q8TCD1 76 aa18.3■□□□□ 0.52
MCF2L-201ENST00000261963 PTPRZ1P23471 2315 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-201ENST00000261963 FAM181BA6NEQ2 426 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 FNDC10F2Z333 226 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 H0YJW9 148 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 LDLRAD2Q5SZI1 272 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 TMEM200BQ69YZ2 307 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 GFRALQ6UXV0 394 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 CST9LQ9H4G1 147 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 TMEM178BH3BS89 294 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 OCIAD2Q56VL3 154 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 SAP30LQ9HAJ7 183 aa18.29■□□□□ 0.52
MCF2L-201ENST00000261963 CEP295Q9C0D2 2601 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 KALRNO60229 2985 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 HSBP1O75506 76 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 USF1P22415 310 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-201ENST00000261963 CRYBB3P26998 211 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 RAB31Q13636 194 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 NUDT10Q8NFP7 164 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 ZNF714Q96N38 554 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 SMIM27A0A1W2PRY6 76 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 ISLRO14498 428 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 TNXAQ16473 311 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 TBR1Q16650 682 aa18.28■□□□□ 0.52
MCF2L-201ENST00000261963 ZNF331Q9NQX6 463 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-201ENST00000261963 EBLN2Q6P2I7 272 aa18.27■□□□□ 0.52
MCF2L-201ENST00000261963 OR8B3Q8NGG8 313 aa18.27■□□□□ 0.52
MCF2L-201ENST00000261963 OR8B2Q96RD0 313 aa18.27■□□□□ 0.52
MCF2L-201ENST00000261963 ZNF835Q9Y2P0 537 aa18.27■□□□□ 0.52
MCF2L-201ENST00000261963 PPIAL4EA0A075B759 164 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 IGKV1OR2-108A0A075B7D4 117 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 PPIAL4DF5H284 164 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 M0R2Z0 102 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 TNFRSF13BO14836 293 aaPredicted RBP18.27■□□□□ 0.51
MCF2L-201ENST00000261963 PPIAL4FP0DN26 164 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 LYPD2Q6UXB3 125 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 SERTAD4Q9NUC0 356 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 SSUH2Q9Y2M2 353 aa18.27■□□□□ 0.51
MCF2L-201ENST00000261963 IZUMO1RA6ND01 250 aa18.26■□□□□ 0.51
MCF2L-201ENST00000261963 UBE2G1P62253 170 aa18.26■□□□□ 0.51
MCF2L-201ENST00000261963 IBA57Q5T440 356 aaKnown RBP18.26■□□□□ 0.51
MCF2L-201ENST00000261963 ERASQ7Z444 233 aa18.26■□□□□ 0.51
MCF2L-201ENST00000261963 CCL17Q92583 94 aa18.26■□□□□ 0.51
MCF2L-201ENST00000261963 ARL2-SNX15V9GYD0 113 aa18.26■□□□□ 0.51
MCF2L-201ENST00000261963 SLAQ13239 276 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 C2orf83Q53S99 150 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 PRR30Q53SZ7 412 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-201ENST00000261963 DCHS1Q96JQ0 3298 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 RNASE2P10153 161 aaKnown RBP18.25■□□□□ 0.51
MCF2L-201ENST00000261963 REG1BP48304 166 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 MIR17HGQ75NE6 70 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 OR10W1Q8NGF6 305 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 OR5AN1Q8NGI8 311 aa18.25■□□□□ 0.51
MCF2L-201ENST00000261963 OSR1Q8TAX0 266 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-201ENST00000261963 HARBI1Q96MB7 349 aa18.24■□□□□ 0.51
MCF2L-201ENST00000261963 MLANAQ16655 118 aa18.24■□□□□ 0.51
MCF2L-201ENST00000261963 MPV17L2Q567V2 206 aa18.24■□□□□ 0.51
MCF2L-201ENST00000261963 TAX1BP3O14907 124 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 ACTL6BO94805 426 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 APOA2P02652 100 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 PSG1P11464 419 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 DIAPH2-AS1Q14236 149 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 PSG5Q15238 335 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 CTSZQ9UBR2 303 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 MGST1P10620 155 aaKnown RBP18.23■□□□□ 0.51
MCF2L-201ENST00000261963 TMEM177Q53S58 311 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 OR1L8Q8NGR8 309 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 H1FXQ92522 213 aaKnown RBP18.23■□□□□ 0.51
MCF2L-201ENST00000261963 RNASE6Q93091 150 aaKnown RBP18.23■□□□□ 0.51
MCF2L-201ENST00000261963 CSTL1Q9H114 145 aa18.23■□□□□ 0.51
MCF2L-201ENST00000261963 TMEM167BQ9NRX6 74 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms