RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TICRRQ7Z2Z1 1910 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 EFNB1P98172 346 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 PARLQ9H300 379 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 FHITP49789 147 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 A0A1B0GWJ7 208 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 CKS1BP61024 79 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 DMRTC2Q8IXT2 367 aaPredicted RBP11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 KIR3DL3Q8N743 410 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 TRBV7-9A0A0J9YWB2 115 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 SRIP30626 198 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 Q8TCH9 128 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 KNTC1P50748 2209 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 MYOFQ9NZM1 2061 aa11.13□□□□□ -0.63
PDGFRB-201ENST00000261799 RIPPLY3P57055 190 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 MRAPQ8TCY5 172 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 RMI2Q96E14 147 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 ZFC3H1O60293 1989 aaKnown RBP11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 TGIF2-C20orf24A0A0A6YYL0 155 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 CD28P10747 220 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 SRSF8Q9BRL6 282 aaKnown RBP11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 KNL1Q8NG31 2342 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 IGKV3D-20A0A0C4DH25 116 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 A0A1B0GUS0 222 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 DANCRP0C864 163 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 RARRES2Q99969 163 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 CBY1Q9Y3M2 126 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 FOLR2P14207 255 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 FOXL1Q12952 345 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 SPOCK3Q9BQ16 436 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 ZSWIM8A7E2V4 1837 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 FCN3O75636 299 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 NDPQ00604 133 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 RBM38Q9H0Z9 239 aaKnown RBP11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
PDGFRB-201ENST00000261799 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 C12orf57Q99622 126 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 IGKV1-9A0A0C4DH69 117 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 F5H768 121 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 GNG5P63218 68 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 HGFACQ04756 655 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 NHLRC3Q5JS37 347 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 IGKV1D-13A0A0B4J2D9 117 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 IGKV1-13P0DP09 117 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 LINC00477Q96M19 166 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 FRMPD3Q5JV73 1810 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 PMCHL1Q16048 86 aa11.11□□□□□ -0.63
PDGFRB-201ENST00000261799 VENTXO95231 258 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 CGB3P0DN86 165 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 CXCL2P19875 107 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 TMEM136Q6ZRR5 245 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 LINC00469Q8N7U9 141 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 OR11H1Q8NG94 326 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 OR11H2Q8NH07 326 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 TCF20Q9UGU0 1960 aaKnown RBP11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 EPDR1Q9UM22 224 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 IGKV1D-17A0A075B6S4 117 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 MST1LQ2TV78 715 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 TCF23Q7RTU1 214 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 SIGLEC9Q9Y336 463 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 SEPSECSQ9HD40 501 aaKnown RBP11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 F11RQ9Y624 299 aaKnown RBP11.1□□□□□ -0.63
PDGFRB-201ENST00000261799 F2Z2F3 143 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 PRO1933Q9H354 126 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 FBLN5Q9UBX5 448 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 PCM1Q15154 2024 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 OVOL3O00110 214 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 APOMO95445 188 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 SUPT4H1P63272 117 aaKnown RBP11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 ORMDL3Q8N138 153 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 RPLP1P05386 114 aaKnown RBP11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 PSG1P11464 419 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 NYNRINQ9P2P1 1898 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms