RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SCGB2A1O75556 95 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 ZNF688P0C7X2 276 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 IGLC1P0CG04 106 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 TMEM187Q14656 261 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 C2orf83Q53S99 150 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 STHQ8IWL8 128 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 SLC24A4Q8NFF2 622 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 PRRT1Q99946 306 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 FBXL17Q9UF56 701 aa13.89□□□□□ -0.19
TM6SF1-201ENST00000258909 KNCNA6PVL3 124 aa13.88□□□□□ -0.19
TM6SF1-201ENST00000258909 C11orf45Q8TAV5 145 aa13.88□□□□□ -0.19
TM6SF1-201ENST00000258909 RAB2BQ8WUD1 216 aa13.88□□□□□ -0.19
TM6SF1-201ENST00000258909 CCDC59Q9P031 241 aaKnown RBP13.88□□□□□ -0.19
TM6SF1-201ENST00000258909 TMEM56-RWDD3S4R434 201 aa13.88□□□□□ -0.19
TM6SF1-201ENST00000258909 ANKRD20A5PA0PJZ0 165 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 OR10J1P30954 320 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 OR1S2Q8NGQ3 325 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 Q8WTZ3 238 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 NARS2Q96I59 477 aaKnown RBP13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 SULT1A3P0DMM9 295 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 SULT1A4P0DMN0 295 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 DCANP1Q8TF63 244 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 NPIPB3Q92617 1050 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 GRAMD2BQ96HH9 432 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 C11orf68Q9H3H3 251 aaKnown RBP13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 MCUBQ9NWR8 336 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 U3KQE9 123 aa13.87□□□□□ -0.19
TM6SF1-201ENST00000258909 GSTZ1O43708 216 aaPredicted RBP13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 GIG44P09565 113 aaPredicted RBP13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 SLC25A4P12235 298 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 AKR1C4P17516 323 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 NPY1RP25929 384 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 TMBIM6P55061 237 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 USF2Q15853 346 aaPredicted RBP13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 TRPT1Q86TN4 253 aaKnown RBP13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 RPP25LQ8N5L8 163 aaKnown RBP13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 ACY3Q96HD9 319 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 SCP2D1Q9UJQ7 156 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 KCNIP3Q9Y2W7 256 aa13.86□□□□□ -0.19
TM6SF1-201ENST00000258909 IL4P05112 153 aa13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 HNRNPCP07910 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 YPEL3P61236 119 aaPredicted RBP13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 DHRS2Q13268 280 aa13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 NMSQ5H8A3 153 aa13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 ACTL10Q5JWF8 245 aa13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 LYZL2Q7Z4W2 148 aa13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 SLIRPQ9GZT3 109 aaKnown RBP13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 RABL2AQ9UBK7 228 aaPredicted RBP13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 RSL24D1Q9UHA3 163 aaKnown RBP13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 RABL2BQ9UNT1 228 aa13.85□□□□□ -0.19
TM6SF1-201ENST00000258909 DEDDO75618 318 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 IFNA10P01566 189 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 C4BPBP20851 252 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 TNFSF8P32971 234 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 SUPT4H1P63272 117 aaKnown RBP13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 C16orf54Q6UWD8 224 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 GLMPQ8WWB7 406 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 MFFQ9GZY8 342 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 DNAH10Q8IVF4 4471 aa13.84□□□□□ -0.19
TM6SF1-201ENST00000258909 VPS13DQ5THJ4 4388 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 FABP12A6NFH5 140 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 IFNA4P05014 189 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 ETFRF1Q6IPR1 90 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 SOSTQ9BQB4 213 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 RBKSQ9H477 322 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 CLEC5AQ9NY25 188 aa13.83□□□□□ -0.2
TM6SF1-201ENST00000258909 HELTA6NFD8 242 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 H3BMQ9 156 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 EIF2B2P49770 351 aaKnown RBP13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 SMCO1Q147U7 214 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 Q8NAQ8 132 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 DTD1Q8TEA8 209 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 SCGB3A2Q96PL1 93 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 BCL7BQ9BQE9 202 aa13.82□□□□□ -0.2
TM6SF1-201ENST00000258909 A0A0B4J2A0 478 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 IGHV4-28A0A0C4DH34 117 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 RBMY1A1P0DJD3 496 aaKnown RBP13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 RBMY1CP0DJD4 496 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 RD3LP0DJH9 198 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 CCR6P51684 374 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 RBMY1FQ15415 496 aaKnown RBP13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 LGI3Q8N145 548 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 MCFD2Q8NI22 146 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 RAB40CQ96S21 281 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 HSPB7Q9UBY9 170 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 SHPKQ9UHJ6 478 aa13.81□□□□□ -0.2
TM6SF1-201ENST00000258909 NOL3O60936 208 aaKnown RBP13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 TOMM40O96008 361 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 SPP1P10451 314 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 PSG1P11464 419 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 MORN3Q6PF18 240 aaPredicted RBP13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 NOXA1Q86UR1 476 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 OR51G1Q8NGK1 321 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 U3KQ87 197 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 BUB3O43684 328 aa13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 AP2S1P53680 142 aaPredicted RBP13.8□□□□□ -0.2
TM6SF1-201ENST00000258909 LGALS9CQ6DKI2 356 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms