RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 OR1N2Q8NGR9 330 aa16.65■□□□□ 0.26
RARA-201ENST00000254066 SLC25A2Q9BXI2 301 aa16.65■□□□□ 0.26
RARA-201ENST00000254066 SIVA1O15304 175 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 PEAR1Q5VY43 1037 aaPredicted RBP16.64■□□□□ 0.25
RARA-201ENST00000254066 Q6ZR03 302 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 OR10AG1Q8NH19 301 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 VSTM2AQ8TAG5 236 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 LINC00479Q96M42 142 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 ZNF257Q9Y2Q1 563 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 HCFC1P51610 2035 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 TET2Q6N021 2002 aaPredicted RBP16.64■□□□□ 0.25
RARA-201ENST00000254066 MED12LQ86YW9 2145 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 POU2AF1Q16633 256 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 TCTEX1D4Q5JR98 221 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 RFESDQ8TAC1 157 aa16.64■□□□□ 0.25
RARA-201ENST00000254066 RPP21Q9H633 154 aaKnown RBP16.64■□□□□ 0.25
RARA-201ENST00000254066 CEP250Q9BV73 2442 aa16.63■□□□□ 0.25
RARA-201ENST00000254066 IGKV1OR2-108A0A075B7D4 117 aa16.63■□□□□ 0.25
RARA-201ENST00000254066 ZNF714Q96N38 554 aa16.63■□□□□ 0.25
RARA-201ENST00000254066 PRSS22Q9GZN4 317 aa16.63■□□□□ 0.25
RARA-201ENST00000254066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.62■□□□□ 0.25
RARA-201ENST00000254066 PSMB11A5LHX3 300 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 CACNA1AO00555 2505 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 FOXA3P55318 350 aaPredicted RBP16.62■□□□□ 0.25
RARA-201ENST00000254066 C2orf83Q53S99 150 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 NPFFR1Q9GZQ6 430 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 PRNDQ9UKY0 176 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 A0A0G2JLM5 398 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 HSD52Q0P140 79 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 GUSBP11Q6P575 273 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 OR9G4Q8NGQ1 327 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 JMJD8Q96S16 334 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 ZNF492Q9P255 531 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 GNG12Q9UBI6 72 aa16.62■□□□□ 0.25
RARA-201ENST00000254066 BOKQ9UMX3 212 aaPredicted RBP16.62■□□□□ 0.25
RARA-201ENST00000254066 FAM87AP0C7U9 286 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 CR1LQ2VPA4 569 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 SIGMAR1Q99720 223 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 KLF12Q9Y4X4 402 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 H3BUT2 72 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 TM4SF5O14894 197 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 TSPAN13O95857 204 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 FGF6P10767 208 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 AZU1P20160 251 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 MDP1Q86V88 176 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 DUSP23Q9BVJ7 150 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 PILRBQ9UKJ0 227 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 TNFRSF18Q9Y5U5 241 aa16.61■□□□□ 0.25
RARA-201ENST00000254066 TMEM189A5PLL7 270 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 WNT9BO14905 357 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 PRCDQ00LT1 54 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 C11orf53Q8IXP5 236 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 TEX45Q8NA69 505 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.6■□□□□ 0.25
RARA-201ENST00000254066 CT55Q8WUE5 264 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 CER1O95813 267 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 PLP1P60201 277 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 HERV-K104P63124 156 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 RBPMS2Q6ZRY4 209 aaKnown RBP16.6■□□□□ 0.25
RARA-201ENST00000254066 GPR82Q96P67 336 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 PAXXQ9BUH6 204 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 IFI27L2Q9H2X8 130 aa16.6■□□□□ 0.25
RARA-201ENST00000254066 ASCC3Q8N3C0 2202 aaKnown RBP16.6■□□□□ 0.25
RARA-201ENST00000254066 RPL39P5Q59GN2 51 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 OR4X2Q8NGF9 303 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 OR1L4Q8NGR5 311 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 OR1L8Q8NGR8 309 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 MLST8Q9BVC4 326 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 FAM234AQ9H0X4 552 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 OR11H12B2RN74 326 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 MYCNOSP40205 109 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 TPRX1Q8N7U7 411 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 OR11H1Q8NG94 326 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 OR11H2Q8NH07 326 aa16.59■□□□□ 0.25
RARA-201ENST00000254066 A0A1W2PPM0 123 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 SRRM4A7MD48 611 aaKnown RBP16.58■□□□□ 0.25
RARA-201ENST00000254066 F2RL2O00254 374 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 CYB561P49447 251 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 KIR3DS1Q14943 382 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 BOD1L2Q8IYS8 172 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 OR2Z1Q8NG97 314 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 NEU4Q8WWR8 484 aaPredicted RBP16.58■□□□□ 0.25
RARA-201ENST00000254066 ADTRPQ96IZ2 230 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 ZNF747Q9BV97 191 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 CXXC4Q9H2H0 198 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 FRYLO94915 3013 aa16.58■□□□□ 0.25
RARA-201ENST00000254066 CHEK1O14757 476 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 FOLR3P41439 243 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 CSN1S1P47710 185 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 SRYQ05066 204 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 PLPPR2Q96GM1 343 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 HINT2Q9BX68 163 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 RABAC1Q9UI14 185 aa16.58■□□□□ 0.24
RARA-201ENST00000254066 DMXL1Q9Y485 3027 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 PINLYPA6NC86 204 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 C19orf71A6NCJ1 209 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 CD69Q07108 199 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 HAX1O00165 279 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 WDR82Q6UXN9 313 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms