RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 OR51B2Q9Y5P1 312 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 SPCS1Q9Y6A9 102 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 TRGV8A0A0C4DH27 118 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 MUC21A0A0G2JKD1 596 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 MUC21A0A140T8X8 626 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 HIGD1CA8MV81 97 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 KIR2DS2P43631 304 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
SOX9-201ENST00000245479 TBR1Q16650 682 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 MUC21Q5SSG8 566 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 LRP4O75096 1905 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 OR2T8A6NH00 312 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 CDKN1BP46527 198 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 HBBP68871 147 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 Q0VG73 95 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 RIGQ13278 110 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 AP5S1Q9NUS5 200 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 PRNDQ9UKY0 176 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 WNK1Q9H4A3 2382 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 K7EM74 188 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 EFNB3Q15768 340 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 HAPLN4Q86UW8 402 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 USP9XQ93008 2570 aaPredicted RBP9.55□□□□□ -0.88
SOX9-201ENST00000245479 A0A087X0K7 114 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 MLNRO43193 412 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 LGALS4P56470 323 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
SOX9-201ENST00000245479 TNFAIP6P98066 277 aaPredicted RBP9.55□□□□□ -0.88
SOX9-201ENST00000245479 SMAGPQ0VAQ4 97 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 TMEM42Q69YG0 159 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 BHLHA15Q7RTS1 189 aaPredicted RBP9.55□□□□□ -0.88
SOX9-201ENST00000245479 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 C2CD3Q4AC94 2353 aa9.55□□□□□ -0.88
SOX9-201ENST00000245479 IGHV2OR16-5A0A0B4J2B6 119 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 FAM90A27PA6NNH2 459 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 COX7A1P24310 79 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 MLANAQ16655 118 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 SPATA31B1PQ5VZV4 182 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 FOXI3A8MTJ6 420 aaPredicted RBP9.54□□□□□ -0.88
SOX9-201ENST00000245479 IGKV1-39P01597 117 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 IGKV1D-39P04432 117 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
SOX9-201ENST00000245479 UTF1Q5T230 341 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 MOB3BQ86TA1 216 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 OR2K2Q8NGT1 345 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 GGTLC1Q9BX51 225 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 SEPSECSQ9HD40 501 aaKnown RBP9.54□□□□□ -0.88
SOX9-201ENST00000245479 S4R3C0 116 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 LRBAP50851 2863 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 A1L4Q6 167 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 LINC00473A8K010 186 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 VSTM5A8MXK1 200 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 CX3CL1P78423 397 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 C1orf185Q5T7R7 199 aa9.54□□□□□ -0.88
SOX9-201ENST00000245479 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 SSC4DQ8WTU2 575 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 MCRIP2Q9BUT9 160 aaKnown RBP9.53□□□□□ -0.88
SOX9-201ENST00000245479 CXXC4Q9H2H0 198 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 THYN1Q9P016 225 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 OR2J3O76001 311 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 ZNF585BQ52M93 769 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 Q6ZR03 302 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 TCF24Q7RTU0 167 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 PRNTQ86SH4 94 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 NCKAP5O14513 1909 aa9.53□□□□□ -0.88
SOX9-201ENST00000245479 LY6HO94772 140 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 CNIH1O95406 144 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 CCL3L1P16619 93 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 CD24P25063 80 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 KIR2DL2P43627 348 aaPredicted RBP9.52□□□□□ -0.88
SOX9-201ENST00000245479 LYZP61626 148 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 C5orf17Q8NAS9 161 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 GRAMD2BQ96HH9 432 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 JKAMPQ9P055 326 aa9.52□□□□□ -0.88
SOX9-201ENST00000245479 IGLL1P15814 213 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 HIST1H1AQ02539 215 aaPredicted RBP9.52□□□□□ -0.89
SOX9-201ENST00000245479 HCP5Q6MZN7 132 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 TMEM108Q6UXF1 575 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 GFRALQ6UXV0 394 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 hADV38S2A0JD32 116 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 IGLV3-1P01715 115 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 RBP4P02753 201 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 HARBI1Q96MB7 349 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 CHODLQ9H9P2 273 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 SORL1Q92673 2214 aa9.52□□□□□ -0.89
SOX9-201ENST00000245479 PRSS47A8MTI9 375 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 FOXH1O75593 365 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 ASCL4Q6XD76 172 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 STXBP6Q8NFX7 210 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 PERPQ96FX8 193 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 ATG2AQ2TAZ0 1938 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 IGHV3-35A0A0C4DH35 117 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms