RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 TAS2R45P59539 299 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 TNXAQ16473 311 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 C10orf113Q5VZT2 155 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 KIR3DL3Q8N743 410 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 Q8NA96 180 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 PRSS33Q8NF86 280 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 NDUFAF3Q9BU61 184 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 SSBP4Q9BWG4 385 aaPredicted RBP13.57□□□□□ -0.24
SSPN-201ENST00000242729 C9JCJ5 164 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 LOXP28300 417 aaPredicted RBP13.57□□□□□ -0.24
SSPN-201ENST00000242729 GPR6P46095 362 aaPredicted RBP13.57□□□□□ -0.24
SSPN-201ENST00000242729 LINC00305Q7Z4B0 112 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 NUP37Q8NFH4 326 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
SSPN-201ENST00000242729 SRIP30626 198 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 RNASE6Q93091 150 aaKnown RBP13.56□□□□□ -0.24
SSPN-201ENST00000242729 AMMECR1Q9Y4X0 333 aaPredicted RBP13.56□□□□□ -0.24
SSPN-201ENST00000242729 E7EQL1 145 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 BATFQ16520 125 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 LINC00574Q9H8X3 128 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 S4R3C0 116 aa13.56□□□□□ -0.24
SSPN-201ENST00000242729 IGKV1D-37A0A075B6S9 117 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 A0A1W2PRD5 423 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 A0A1W2PRF3 423 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 A0A1W2PRM7 423 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 C22orf46C9J442 243 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 NTF3P20783 257 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 GRNP28799 593 aaKnown RBP13.55□□□□□ -0.24
SSPN-201ENST00000242729 CAMPP49913 170 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 Q71RC1 249 aaPredicted RBP13.55□□□□□ -0.24
SSPN-201ENST00000242729 FAM87AP0C7U9 286 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
SSPN-201ENST00000242729 G0S2P27469 103 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 MFAP2P55001 183 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 SNHG12Q9BXW3 62 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 NCOR1P1Q9H4R4 102 aa13.55□□□□□ -0.24
SSPN-201ENST00000242729 TPPP2P59282 170 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 NOL4LQ96MY1 436 aaPredicted RBP13.54□□□□□ -0.24
SSPN-201ENST00000242729 WASHC3Q9Y3C0 194 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 A0A1W2PN81 502 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 PSMB11A5LHX3 300 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 ZNF253O75346 499 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 TMEM177Q53S58 311 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 ATOH7Q8N100 152 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 IGF2BP2-AS1Q96M15 143 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 PPOXP50336 477 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 TDGF1P3P51864 188 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 SLAQ13239 276 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 FBXL7Q9UJT9 491 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
SSPN-201ENST00000242729 VPS13CQ709C8 3753 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 IGHV1-8P0DP01 117 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 AMTP48728 403 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 CX3CL1P78423 397 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 FOXC1Q12948 553 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 DNLZQ5SXM8 178 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 TNFRSF19Q9NS68 423 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 MEF2CQ06413 473 aaPredicted RBP13.53□□□□□ -0.24
SSPN-201ENST00000242729 ZNF841Q6ZN19 808 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 TMEM167AQ8TBQ9 72 aa13.53□□□□□ -0.24
SSPN-201ENST00000242729 TBL2Q9Y4P3 447 aaKnown RBP13.53□□□□□ -0.24
SSPN-201ENST00000242729 PAX1P15863 534 aa13.52□□□□□ -0.24
SSPN-201ENST00000242729 SELENOTP62341 195 aa13.52□□□□□ -0.24
SSPN-201ENST00000242729 ZNF329Q86UD4 541 aa13.52□□□□□ -0.24
SSPN-201ENST00000242729 SIGLECL1Q8N7X8 197 aa13.52□□□□□ -0.24
SSPN-201ENST00000242729 CDC42EP3Q9UKI2 254 aa13.52□□□□□ -0.24
SSPN-201ENST00000242729 TCRBV4S1A1TA0A5B7 111 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 FAM90A27PA6NNH2 459 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 SHISA9B4DS77 424 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 BMPR1BO00238 502 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 SLC25A5P05141 298 aaKnown RBP13.52□□□□□ -0.25
SSPN-201ENST00000242729 SSTP61278 116 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 C3orf36Q3SXR2 165 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 ST6GALNAC6Q969X2 333 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 TMEM68Q96MH6 324 aa13.52□□□□□ -0.25
SSPN-201ENST00000242729 IGHV1-69-2A0A0G2JMI3 117 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 A0A1W2PRE2 83 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 PGPA6NDG6 321 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 TPTE2P1Q5T6R2 138 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 WNT10AQ9GZT5 417 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 FBXL15Q9H469 300 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 TRAV8-1A0A0A6YYK1 113 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 A6NNC1 897 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 PEX7O00628 323 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 TAS2R60P59551 318 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 C11orf42Q8N5U0 333 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 FXYD5Q96DB9 178 aa13.51□□□□□ -0.25
SSPN-201ENST00000242729 VMA21Q3ZAQ7 101 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 TCF24Q7RTU0 167 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 PDPNQ86YL7 162 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 NUDT10Q8NFP7 164 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 NUDT11Q96G61 164 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 M0QZ24 198 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 C1orf194Q5T5A4 169 aa13.5□□□□□ -0.25
SSPN-201ENST00000242729 IGF2-ASQ6U949 168 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms